Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06130

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,347,244	-				+0.5
1,347,244	-				+0.1
1,347,439	+				-0.4
1,347,439	+				-0.5
1,347,439	+				+0.2
1,347,439	+				-0.0
1,347,439	+				-0.7
1,347,439	+				+0.0
1,347,439	+				-0.3
1,347,439	+				+0.1
1,347,440	-				+2.3
1,347,663	+		RR42_RS06130	0.45	+0.4
1,347,734	-		RR42_RS06130	0.59	+0.0
1,347,734	-		RR42_RS06130	0.59	-0.1
1,347,734	-		RR42_RS06130	0.59	+0.4
1,347,734	-		RR42_RS06130	0.59	+0.2
1,347,989	+				-0.7
1,347,990	-				-0.2
1,348,039	+				+0.1
1,348,040	-				-0.1
1,348,040	-				+0.7
1,348,040	-				+0.0
1,348,040	-				-0.6
1,348,040	-				+0.1
1,348,040	-				+0.3
1,348,040	-				-0.3
1,348,040	-				+0.1
1,348,043	+				-0.3
1,348,043	+				+0.3
1,348,044	-				+0.1
1,348,044	-				-0.5
1,348,048	+				+0.1
1,348,048	+				-0.2
1,348,049	-				-0.5
1,348,049	-				+0.4
1,348,051	-				-0.6
1,348,307	+				-0.5
1,348,307	+				+1.1
1,348,308	-				-0.2
1,348,308	-				-0.4
1,348,308	-				+1.2
1,348,308	-				-1.3
1,348,561	+		RR42_RS06135	0.24	+0.4
1,348,561	+		RR42_RS06135	0.24	+0.4
1,348,561	+		RR42_RS06135	0.24	-1.3
1,348,565	+		RR42_RS06135	0.24	+0.2
1,348,565	+		RR42_RS06135	0.24	+0.4
1,348,566	-		RR42_RS06135	0.25	-0.6
1,348,617	-		RR42_RS06135	0.28	+0.3
1,348,632	-		RR42_RS06135	0.29	-0.0
1,348,669	+		RR42_RS06135	0.32	+0.3
1,348,673	+		RR42_RS06135	0.32	-0.1
1,348,674	-		RR42_RS06135	0.32	-0.4
1,348,698	+		RR42_RS06135	0.33	+0.1
1,348,699	-		RR42_RS06135	0.34	+0.1
1,348,699	-		RR42_RS06135	0.34	-0.2
1,348,699	-		RR42_RS06135	0.34	-0.1
1,348,724	+		RR42_RS06135	0.35	+0.5
1,348,766	+		RR42_RS06135	0.38	+0.1
1,348,766	+		RR42_RS06135	0.38	+1.1
1,348,766	+				+2.1
1,348,766	+		RR42_RS06135	0.38	-0.1
1,348,767	-		RR42_RS06135	0.38	-0.4
1,348,767	-		RR42_RS06135	0.38	-0.9
1,348,847	+		RR42_RS06135	0.44	+0.6
1,348,848	-		RR42_RS06135	0.44	-1.0
1,348,897	-		RR42_RS06135	0.47	-2.2
1,348,934	+		RR42_RS06135	0.49	+0.5
1,348,934	+		RR42_RS06135	0.49	+0.7
1,348,935	-		RR42_RS06135	0.50	-0.4
1,348,935	-		RR42_RS06135	0.50	-0.6
1,348,935	-		RR42_RS06135	0.50	+0.4