Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05760

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,266,178	+				+0.1
1,266,862	+		RR42_RS05755	0.88	-0.5
1,266,862	+		RR42_RS05755	0.88	-0.6
1,266,863	-		RR42_RS05755	0.88	-0.7
1,266,863	-		RR42_RS05755	0.88	+0.2
1,267,050	+				-0.3
1,267,050	+				-0.3
1,267,164	-				+0.2
1,267,164	-				-0.5
1,267,213	-		RR42_RS05760	0.11	-0.1
1,267,476	-		RR42_RS05760	0.28	+1.3
1,267,593	-		RR42_RS05760	0.36	+0.9
1,267,723	-		RR42_RS05760	0.44	-1.1
1,267,810	-		RR42_RS05760	0.50	-0.6
1,267,821	+		RR42_RS05760	0.51	+0.6
1,267,821	+		RR42_RS05760	0.51	-0.8
1,267,973	-		RR42_RS05760	0.61	+0.5
1,267,973	-		RR42_RS05760	0.61	+0.0
1,268,035	+		RR42_RS05760	0.65	-0.2
1,268,035	+		RR42_RS05760	0.65	+0.3
1,268,035	+		RR42_RS05760	0.65	+0.1
1,268,419	+		RR42_RS05760	0.90	+0.2
1,268,430	+				-0.7
1,268,431	-				-0.1
1,268,464	+				-0.0
1,268,465	-				-0.2
1,268,465	-				+0.1
1,268,465	-				-0.1
1,268,469	+				-0.5
1,268,470	-				+0.3
1,268,572	+				-0.1
1,268,572	+				-0.2
1,268,572	+				-0.3
1,268,572	+				-0.4
1,268,573	-				-0.2
1,268,573	-				+0.6
1,268,731	+				-0.3
1,268,732	-				-3.1
1,268,732	-				+0.7
1,268,736	+				+1.5
1,268,838	+				-0.1
1,268,838	+				+0.0
1,268,839	-				-0.7
1,268,839	-				-0.8
1,268,839	-				+0.3
1,268,841	+				-0.8
1,268,841	+				-0.2
1,268,842	-				+0.1
1,268,842	-				+0.8
1,268,949	+		RR42_RS05765	0.22	-0.3
1,268,949	+		RR42_RS05765	0.22	+0.3
1,268,949	+		RR42_RS05765	0.22	-0.1
1,268,949	+		RR42_RS05765	0.22	+1.6
1,268,950	-		RR42_RS05765	0.23	-0.7
1,268,950	-		RR42_RS05765	0.23	-0.2
1,268,974	+		RR42_RS05765	0.26	-0.3
1,268,990	-		RR42_RS05765	0.29	-1.0
1,269,000	+		RR42_RS05765	0.30	-0.0
1,269,000	+		RR42_RS05765	0.30	-0.6
1,269,015	+		RR42_RS05765	0.33	-0.5
1,269,093	+		RR42_RS05765	0.45	-0.2
1,269,121	-		RR42_RS05765	0.49	+0.4
1,269,192	+		RR42_RS05765	0.60	-0.2
1,269,192	+		RR42_RS05765	0.60	-0.2
1,269,193	-		RR42_RS05765	0.60	-0.6
1,269,193	-		RR42_RS05765	0.60	-0.5
1,269,193	-		RR42_RS05765	0.60	+0.9
1,269,193	-		RR42_RS05765	0.60	+0.4
1,269,194	+		RR42_RS05765	0.61	-0.1
1,269,251	+		RR42_RS05765	0.69	+1.7
1,269,252	-		RR42_RS05765	0.70	-1.5
1,269,316	-		RR42_RS05765	0.80	+0.1
1,269,316	-		RR42_RS05765	0.80	-0.2
1,269,316	-		RR42_RS05765	0.80	+0.7
1,269,354	+		RR42_RS05765	0.86	+0.4
1,269,354	+		RR42_RS05765	0.86	+0.7
1,269,355	-		RR42_RS05765	0.86	+1.6
1,269,416	+				+0.3
1,269,444	+				-1.8
1,269,444	+				-0.1
1,269,522	+				+1.2
1,269,522	+				-0.2
1,269,522	+				-0.0
1,269,522	+				-0.3
1,269,523	-				+1.5
1,269,523	-				-0.4
1,269,523	-				-0.9