Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05605

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,233,686	-		RR42_RS05600	0.50	+0.1
1,233,686	-		RR42_RS05600	0.50	+0.7
1,233,692	+		RR42_RS05600	0.51	-0.3
1,233,724	+		RR42_RS05600	0.54	-0.6
1,233,725	-		RR42_RS05600	0.54	-0.3
1,233,872	+		RR42_RS05600	0.67	-0.3
1,233,872	+		RR42_RS05600	0.67	-1.1
1,234,356	-				-1.3
1,234,398	+				-0.8
1,234,485	+		RR42_RS05605	0.22	+1.0
1,234,486	-		RR42_RS05605	0.22	-0.7
1,234,486	-		RR42_RS05605	0.22	-0.4
1,234,486	-		RR42_RS05605	0.22	-1.3
1,234,486	-		RR42_RS05605	0.22	-0.3
1,234,536	+		RR42_RS05605	0.33	+0.6
1,234,536	+		RR42_RS05605	0.33	-0.5
1,234,537	-		RR42_RS05605	0.34	-1.8
1,234,537	-		RR42_RS05605	0.34	+0.2
1,234,668	+		RR42_RS05605	0.63	+0.2
1,234,668	+		RR42_RS05605	0.63	+0.5
1,234,815	+				+0.6
1,234,815	+				+0.1
1,234,815	+				+0.6
1,234,816	-				-0.9
1,234,816	-				-0.8
1,234,816	-				+0.5
1,234,816	-				-0.8
1,234,816	-				-0.9
1,234,884	+				+0.1
1,234,884	+				-2.2
1,234,884	+				-0.3
1,234,885	-				-2.1
1,234,885	-				+0.1
1,234,893	+				-0.3
1,234,893	+				+2.2
1,234,894	-				+0.5
1,234,894	-				+0.4
1,234,902	+				-1.2
1,234,902	+				-0.1
1,234,925	-				-1.7
1,235,187	-		RR42_RS05610	0.56	-0.3
1,235,209	+		RR42_RS05610	0.60	-0.7
1,235,397	-				-1.0
1,235,397	-				-0.3
1,235,623	+		RR42_RS05615	0.13	-0.2
1,235,835	-		RR42_RS05615	0.29	+0.5