Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS03815

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
842,583	-		RR42_RS03810	0.78	-0.8
842,723	-		RR42_RS03810	0.84	-1.1
843,061	+				-0.6
843,293	+				+0.0
843,348	+				-0.1
843,349	-				-0.3
843,468	-		RR42_RS03815	0.17	-0.4
843,485	+		RR42_RS03815	0.19	-0.3
843,786	-		RR42_RS03815	0.57	-1.4
843,815	+		RR42_RS03815	0.61	+0.3
843,864	-		RR42_RS03815	0.67	+0.4
844,040	+				-0.5
844,085	+				-0.8
844,085	+				-0.6
844,086	-				-0.3
844,174	-				+0.3
844,183	+				-0.5
844,183	+				+0.1
844,184	-				-1.0
844,229	-				+1.5
844,313	-		RR42_RS03820	0.29	-0.2
844,313	-		RR42_RS03820	0.29	-0.9
844,387	-		RR42_RS03820	0.59	-0.8
844,462	+				-0.1
844,463	-				-2.1
844,463	-				-0.5
844,463	-				-0.1
844,463	-				-0.2
844,463	-				+0.6
844,540	-				-0.1
844,540	-				-0.1
844,545	-				-0.2
844,545	-				-0.2
844,600	+				-0.6
844,601	-				-1.1
844,601	-				-0.1
844,732	-		RR42_RS03825	0.17	+0.0
844,864	-		RR42_RS03825	0.33	-0.5
845,078	-		RR42_RS03825	0.60	-0.7