Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS01455
Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Polymyxin B sulfate 0.005 mg/ml |
---|---|---|---|---|---|
remove | |||||
326,257 | - | RR42_RS01450 | 0.26 | +2.4 | |
326,451 | + | RR42_RS01450 | 0.49 | -0.7 | |
326,520 | + | RR42_RS01450 | 0.57 | -0.4 | |
326,690 | + | RR42_RS01450 | 0.76 | +2.8 | |
326,814 | + | -0.6 | |||
326,814 | + | -0.3 | |||
326,814 | + | -0.1 | |||
326,814 | + | +0.2 | |||
326,814 | + | -0.3 | |||
326,814 | + | +0.3 | |||
326,814 | + | -0.2 | |||
326,814 | + | -0.3 | |||
326,815 | - | +0.2 | |||
326,815 | - | +0.6 | |||
326,815 | - | -0.7 | |||
326,861 | + | -0.0 | |||
326,862 | - | +0.7 | |||
326,862 | - | +1.2 | |||
326,862 | - | -0.5 | |||
326,862 | - | -0.8 | |||
326,862 | - | -1.0 | |||
326,862 | - | -2.0 | |||
326,867 | + | +0.0 | |||
326,868 | + | -0.3 | |||
326,868 | - | -0.4 | |||
326,977 | + | +0.1 | |||
326,977 | + | +0.5 | |||
326,977 | + | +1.7 | |||
326,977 | + | -0.3 | |||
326,977 | + | -0.5 | |||
326,977 | + | -0.3 | |||
326,978 | - | -1.1 | |||
326,978 | - | -1.2 | |||
326,978 | - | -0.1 | |||
326,978 | - | -2.3 | |||
326,978 | - | -0.6 | |||
326,978 | - | -0.7 | |||
327,117 | + | +0.6 | |||
327,141 | + | +0.2 | |||
327,141 | + | -0.9 |
Or see this region's nucleotide sequence