Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_966

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
1,094,307	-		Pf1N1B4_965	0.18	+0.4
1,094,307	-		Pf1N1B4_965	0.18	+0.1
1,094,325	-		Pf1N1B4_965	0.19	+0.1
1,094,325	-				+0.1
1,094,336	+		Pf1N1B4_965	0.20	+1.6
1,094,336	+		Pf1N1B4_965	0.20	-0.0
1,094,337	-		Pf1N1B4_965	0.21	-0.2
1,094,411	+		Pf1N1B4_965	0.28	+1.1
1,094,411	+		Pf1N1B4_965	0.28	+0.6
1,094,412	-		Pf1N1B4_965	0.28	+2.4
1,094,412	-		Pf1N1B4_965	0.28	+0.2
1,094,412	-		Pf1N1B4_965	0.28	-1.5
1,094,495	+		Pf1N1B4_965	0.36	-2.3
1,094,495	+		Pf1N1B4_965	0.36	-1.3
1,094,496	-		Pf1N1B4_965	0.36	+0.6
1,094,496	-		Pf1N1B4_965	0.36	+1.1
1,094,496	-		Pf1N1B4_965	0.36	+0.5
1,094,496	-		Pf1N1B4_965	0.36	+1.4
1,094,496	-		Pf1N1B4_965	0.36	-0.4
1,094,496	-		Pf1N1B4_965	0.36	+1.1
1,094,507	+		Pf1N1B4_965	0.37	+1.1
1,094,507	+		Pf1N1B4_965	0.37	+0.5
1,094,508	-		Pf1N1B4_965	0.37	+0.1
1,094,508	-		Pf1N1B4_965	0.37	+0.5
1,094,534	-		Pf1N1B4_965	0.39	+0.1
1,094,744	+		Pf1N1B4_965	0.60	+0.1
1,094,744	+		Pf1N1B4_965	0.60	-0.1
1,094,855	+		Pf1N1B4_965	0.70	+0.5
1,094,855	+		Pf1N1B4_965	0.70	+2.6
1,094,855	+		Pf1N1B4_965	0.70	+0.5
1,094,855	+		Pf1N1B4_965	0.70	+0.1
1,094,855	+		Pf1N1B4_965	0.70	-0.4
1,094,855	+		Pf1N1B4_965	0.70	+0.4
1,094,855	+		Pf1N1B4_965	0.70	+0.2
1,094,856	-		Pf1N1B4_965	0.70	-1.7
1,094,856	-		Pf1N1B4_965	0.70	+0.7
1,094,898	-		Pf1N1B4_965	0.74	+0.1
1,094,898	-		Pf1N1B4_965	0.74	+0.1
1,094,951	+		Pf1N1B4_965	0.80	+0.4
1,094,951	+		Pf1N1B4_965	0.80	+0.3
1,094,951	+		Pf1N1B4_965	0.80	-0.7
1,094,951	+		Pf1N1B4_965	0.80	+0.1
1,094,951	+		Pf1N1B4_965	0.80	+0.5
1,094,951	+		Pf1N1B4_965	0.80	+0.2
1,094,952	-		Pf1N1B4_965	0.80	+1.6
1,094,955	+		Pf1N1B4_965	0.80	-0.5
1,094,955	+		Pf1N1B4_965	0.80	+1.1
1,094,955	+		Pf1N1B4_965	0.80	+0.6
1,094,955	+		Pf1N1B4_965	0.80	-0.5
1,094,955	+		Pf1N1B4_965	0.80	+0.3
1,094,955	+		Pf1N1B4_965	0.80	+1.1
1,094,956	-		Pf1N1B4_965	0.80	-0.3
1,094,956	-		Pf1N1B4_965	0.80	+1.9
1,094,956	-		Pf1N1B4_965	0.80	-0.5
1,095,173	-				-0.5
1,095,315	+				+1.1
1,095,315	+				+0.3
1,095,315	+				-0.9
1,095,316	-				-1.4
1,095,316	-				+0.1
1,095,316	-				-0.5
1,095,316	-				-0.1
1,095,316	-				-1.3
1,095,316	-				+1.2
1,095,316	-				-0.5
1,095,316	-				+1.9
1,095,316	-				+0.5
1,095,438	+		Pf1N1B4_966	0.15	+1.3
1,095,438	+		Pf1N1B4_966	0.15	+0.1
1,095,438	+		Pf1N1B4_966	0.15	-0.5
1,095,438	+		Pf1N1B4_966	0.15	+0.5
1,095,438	+		Pf1N1B4_966	0.15	-1.9
1,095,439	-		Pf1N1B4_966	0.15	+0.1
1,095,439	-		Pf1N1B4_966	0.15	+0.9
1,095,439	-		Pf1N1B4_966	0.15	+2.1
1,095,439	-		Pf1N1B4_966	0.15	+1.1
1,095,439	-		Pf1N1B4_966	0.15	+0.8
1,095,439	-		Pf1N1B4_966	0.15	+0.1
1,095,439	-		Pf1N1B4_966	0.15	+0.6
1,095,764	+		Pf1N1B4_966	0.44	+0.6
1,095,764	+		Pf1N1B4_966	0.44	+0.6
1,095,765	-		Pf1N1B4_966	0.44	-1.9
1,095,765	-		Pf1N1B4_966	0.44	+0.1
1,095,765	-		Pf1N1B4_966	0.44	+0.1
1,095,765	-		Pf1N1B4_966	0.44	+1.1
1,095,842	+		Pf1N1B4_966	0.51	+0.6
1,095,957	+		Pf1N1B4_966	0.61	+1.6
1,095,958	-		Pf1N1B4_966	0.61	+0.5
1,095,958	-		Pf1N1B4_966	0.61	+0.5
1,095,971	+		Pf1N1B4_966	0.62	+0.4
1,095,971	+		Pf1N1B4_966	0.62	-0.8
1,095,971	+		Pf1N1B4_966	0.62	+1.6
1,095,972	-		Pf1N1B4_966	0.62	-1.5
1,095,972	-		Pf1N1B4_966	0.62	-1.5
1,095,972	-		Pf1N1B4_966	0.62	-0.3
1,096,071	+		Pf1N1B4_966	0.71	-0.9
1,096,071	+		Pf1N1B4_966	0.71	+0.1
1,096,071	+		Pf1N1B4_966	0.71	+0.1
1,096,071	+		Pf1N1B4_966	0.71	+0.3
1,096,072	-		Pf1N1B4_966	0.71	-0.2
1,096,072	-		Pf1N1B4_966	0.71	-0.5
1,096,072	-		Pf1N1B4_966	0.71	+2.9
1,096,110	+		Pf1N1B4_966	0.74	+0.6
1,096,110	+		Pf1N1B4_966	0.74	+0.5
1,096,110	+		Pf1N1B4_966	0.74	+1.2
1,096,111	-		Pf1N1B4_966	0.74	-0.9
1,096,111	-		Pf1N1B4_966	0.74	+0.1
1,096,111	-		Pf1N1B4_966	0.74	+0.5
1,096,111	-				-0.9
1,096,111	-		Pf1N1B4_966	0.74	+1.4
1,096,111	-		Pf1N1B4_966	0.74	+0.5
1,096,194	+		Pf1N1B4_966	0.82	+1.1
1,096,222	-		Pf1N1B4_966	0.84	-0.4
1,096,290	+				+0.5
1,096,290	+				+1.1
1,096,290	+				-3.1
1,096,290	+				+2.1
1,096,290	+				-0.4
1,096,291	-				-0.7
1,096,291	-				-3.1
1,096,291	-				-0.3
1,096,291	-				+0.5
1,096,291	-				-1.5
1,096,448	-				+1.1
1,096,448	-				+0.1
1,096,448	-				+0.3
1,096,448	-				+0.6
1,096,529	-				+1.4
1,096,530	+				+0.8
1,096,531	-				+0.2
1,096,531	-				+0.3
1,096,531	-				+0.2
1,096,531	-				+0.4
1,096,536	+				-0.5
1,096,547	+		Pf1N1B4_967	0.17	-0.5
1,096,548	-		Pf1N1B4_967	0.17	+2.8
1,096,548	-		Pf1N1B4_967	0.17	-0.3
1,096,548	-		Pf1N1B4_967	0.17	+0.1
1,096,548	-		Pf1N1B4_967	0.17	-0.2
1,096,908	-		Pf1N1B4_968	0.31	-0.5
1,096,965	+		Pf1N1B4_968	0.37	+0.1
1,096,966	-		Pf1N1B4_968	0.37	+1.6
1,097,088	+		Pf1N1B4_968	0.50	+0.3
1,097,089	-		Pf1N1B4_968	0.51	+2.4
1,097,089	-		Pf1N1B4_968	0.51	+3.2
1,097,089	-		Pf1N1B4_968	0.51	-0.9
1,097,089	-		Pf1N1B4_968	0.51	+1.1
1,097,089	-		Pf1N1B4_968	0.51	+1.3
1,097,094	+		Pf1N1B4_968	0.51	-0.5
1,097,094	+		Pf1N1B4_968	0.51	+1.6
1,097,094	+		Pf1N1B4_968	0.51	+2.6
1,097,094	+		Pf1N1B4_968	0.51	+1.6
1,097,095	-		Pf1N1B4_968	0.51	+1.3
1,097,095	-		Pf1N1B4_968	0.51	+0.1
1,097,095	-		Pf1N1B4_968	0.51	-0.1
1,097,095	-				-0.9
1,097,172	+		Pf1N1B4_968	0.60	-0.5
1,097,172	+		Pf1N1B4_968	0.60	-0.9
1,097,172	+		Pf1N1B4_968	0.60	+0.1