Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3823

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
4,235,761	+		Pf1N1B4_3822	0.37	-2.4
4,236,177	+		Pf1N1B4_3822	0.72	-2.2
4,236,512	+				-0.8
4,236,512	+				-1.0
4,236,512	+				-0.8
4,236,512	+				+2.4
4,236,513	-				+0.8
4,236,576	+				-1.8
4,236,576	+				+0.6
4,236,576	+				-2.2
4,236,576	+				-1.2
4,236,576	+				-0.5
4,236,576	+				-1.5
4,236,576	+				+1.2
4,236,576	+				+0.8
4,236,576	+				+1.1
4,236,576	+				-2.2
4,236,576	+				+0.8
4,236,576	+				-0.2
4,236,576	+				+0.4
4,236,576	+				-0.9
4,236,576	+				-0.2
4,236,576	+				-1.8
4,236,576	+				-0.2
4,236,576	+				+1.4
4,236,577	-				+0.3
4,236,577	-				-0.2
4,236,577	-				-0.5
4,236,577	-				-0.2
4,236,577	-				+2.6
4,236,577	-				-0.1
4,236,577	-				-0.8
4,236,577	-				-0.2
4,236,577	-				-0.2
4,236,577	-				-1.2
4,236,577	-				+0.0
4,236,577	-				-1.9
4,236,577	-				+1.8
4,236,577	-				+1.0
4,236,577	-				-0.2
4,236,577	-				-0.8
4,236,577	-				-0.5
4,236,588	+				+1.8
4,236,589	-				-0.2
4,236,589	-				+0.4
4,236,589	-				+0.0
4,236,752	+				-1.2
4,236,753	-				+0.1
4,236,783	-				+1.3
4,236,783	-				-0.6
4,236,783	-				-1.2
4,236,783	-				+0.1
4,237,019	+		Pf1N1B4_3823	0.20	+0.4
4,237,020	-		Pf1N1B4_3823	0.20	-0.8
4,237,020	-		Pf1N1B4_3823	0.20	-2.2
4,237,345	+		Pf1N1B4_3823	0.42	+0.6
4,237,345	+				-1.8
4,237,346	-		Pf1N1B4_3823	0.42	-0.2
4,237,346	-		Pf1N1B4_3823	0.42	-0.2
4,237,346	-		Pf1N1B4_3823	0.42	-0.2
4,237,346	-		Pf1N1B4_3823	0.42	+0.4
4,237,346	-		Pf1N1B4_3823	0.42	-0.8
4,237,346	-		Pf1N1B4_3823	0.42	-0.2
4,237,346	-		Pf1N1B4_3823	0.42	-0.2
4,237,378	+		Pf1N1B4_3823	0.45	+1.0
4,237,378	+		Pf1N1B4_3823	0.45	+2.1
4,237,379	-		Pf1N1B4_3823	0.45	+1.4
4,237,416	+		Pf1N1B4_3823	0.47	-0.2
4,237,416	+		Pf1N1B4_3823	0.47	-1.8
4,237,416	+		Pf1N1B4_3823	0.47	+0.4
4,237,417	-		Pf1N1B4_3823	0.47	+1.8
4,237,417	-		Pf1N1B4_3823	0.47	+0.2
4,237,454	-		Pf1N1B4_3823	0.50	+0.2
4,237,490	+		Pf1N1B4_3823	0.52	-1.2
4,237,491	-		Pf1N1B4_3823	0.52	-0.9
4,237,580	+		Pf1N1B4_3823	0.58	+1.1
4,237,580	+		Pf1N1B4_3823	0.58	-0.2
4,237,581	-		Pf1N1B4_3823	0.58	-0.2
4,237,581	-		Pf1N1B4_3823	0.58	+1.4
4,237,581	-		Pf1N1B4_3823	0.58	+1.4
4,237,581	-		Pf1N1B4_3823	0.58	+2.1
4,237,793	+		Pf1N1B4_3823	0.73	-0.2
4,237,793	+		Pf1N1B4_3823	0.73	+0.1
4,237,793	+		Pf1N1B4_3823	0.73	-1.2
4,237,793	+		Pf1N1B4_3823	0.73	+0.7
4,237,793	+				+1.8
4,237,793	+		Pf1N1B4_3823	0.73	-0.0
4,237,794	-		Pf1N1B4_3823	0.73	+0.6
4,237,794	-		Pf1N1B4_3823	0.73	-0.2
4,237,794	-		Pf1N1B4_3823	0.73	-0.2
4,237,794	-		Pf1N1B4_3823	0.73	+0.1
4,237,794	-		Pf1N1B4_3823	0.73	-1.2
4,237,794	-		Pf1N1B4_3823	0.73	-2.8
4,237,841	+		Pf1N1B4_3823	0.76	+0.8
4,237,841	+		Pf1N1B4_3823	0.76	+0.4
4,237,842	-		Pf1N1B4_3823	0.76	+1.1
4,237,932	-		Pf1N1B4_3823	0.82	+1.5
4,238,008	-		Pf1N1B4_3823	0.87	-0.2
4,238,008	-		Pf1N1B4_3823	0.87	-0.2
4,238,198	+				+1.2
4,238,198	+				+1.1
4,238,198	+				+0.0
4,238,199	-				+1.4
4,238,199	-				-0.2
4,238,199	-				-0.5
4,238,336	+				+1.4
4,238,337	-				-0.4
4,238,337	-				-0.8
4,238,393	-				+0.8
4,238,627	+		Pf1N1B4_3824	0.36	+1.4
4,238,628	-		Pf1N1B4_3824	0.36	+0.4
4,238,663	+		Pf1N1B4_3824	0.40	-1.2
4,238,663	+		Pf1N1B4_3824	0.40	+0.4
4,238,663	+		Pf1N1B4_3824	0.40	+0.4
4,238,663	+		Pf1N1B4_3824	0.40	-1.2
4,238,663	+		Pf1N1B4_3824	0.40	-1.4
4,238,663	+		Pf1N1B4_3824	0.40	+0.4
4,238,663	+				+0.8
4,238,663	+		Pf1N1B4_3824	0.40	-0.2
4,238,664	-		Pf1N1B4_3824	0.40	+0.8
4,238,664	-		Pf1N1B4_3824	0.40	+0.6
4,238,664	-		Pf1N1B4_3824	0.40	+0.8
4,238,664	-		Pf1N1B4_3824	0.40	+0.6
4,238,664	-				+1.4
4,238,664	-		Pf1N1B4_3824	0.40	-0.4
4,238,664	-		Pf1N1B4_3824	0.40	-0.5
4,238,664	-		Pf1N1B4_3824	0.40	-0.2
4,238,664	-		Pf1N1B4_3824	0.40	+1.6
4,238,682	+				+0.8
4,238,683	-		Pf1N1B4_3824	0.42	-0.2
4,238,683	-		Pf1N1B4_3824	0.42	-0.2
4,238,704	+		Pf1N1B4_3824	0.45	-0.1
4,238,705	-				+0.8
4,238,705	-		Pf1N1B4_3824	0.45	+1.1
4,238,707	+		Pf1N1B4_3824	0.45	+0.1
4,238,707	+		Pf1N1B4_3824	0.45	-2.2
4,238,708	-		Pf1N1B4_3824	0.46	+3.6
4,238,708	-		Pf1N1B4_3824	0.46	+0.5
4,238,726	+		Pf1N1B4_3824	0.48	-0.5
4,238,726	+		Pf1N1B4_3824	0.48	+0.4
4,238,726	+		Pf1N1B4_3824	0.48	+0.2
4,238,727	-		Pf1N1B4_3824	0.48	+1.3
4,238,727	-		Pf1N1B4_3824	0.48	+1.2
4,238,727	-		Pf1N1B4_3824	0.48	-0.2
4,238,727	-		Pf1N1B4_3824	0.48	+0.6
4,238,729	+		Pf1N1B4_3824	0.48	-0.2
4,238,729	+		Pf1N1B4_3824	0.48	+0.4
4,238,729	+		Pf1N1B4_3824	0.48	-1.2
4,238,729	+		Pf1N1B4_3824	0.48	-1.2
4,238,729	+				+0.4
4,238,729	+		Pf1N1B4_3824	0.48	-0.6
4,238,729	+		Pf1N1B4_3824	0.48	-0.8
4,238,729	+		Pf1N1B4_3824	0.48	-2.0
4,238,729	+		Pf1N1B4_3824	0.48	-1.8
4,238,730	-		Pf1N1B4_3824	0.48	+1.6
4,238,792	+		Pf1N1B4_3824	0.56	+0.4
4,238,792	+		Pf1N1B4_3824	0.56	+0.2
4,238,792	+		Pf1N1B4_3824	0.56	+0.1
4,238,792	+		Pf1N1B4_3824	0.56	-1.8
4,238,792	+		Pf1N1B4_3824	0.56	-1.2
4,238,792	+		Pf1N1B4_3824	0.56	-0.8
4,238,792	+		Pf1N1B4_3824	0.56	-1.2
4,238,792	+		Pf1N1B4_3824	0.56	-1.8
4,238,793	-		Pf1N1B4_3824	0.56	+1.6
4,238,793	-		Pf1N1B4_3824	0.56	+0.4
4,238,793	-		Pf1N1B4_3824	0.56	+0.7
4,238,834	+		Pf1N1B4_3824	0.61	-0.2
4,238,834	+				+1.8
4,238,834	+		Pf1N1B4_3824	0.61	+0.2
4,238,834	+		Pf1N1B4_3824	0.61	+0.6
4,238,834	+		Pf1N1B4_3824	0.61	-0.2
4,238,835	-		Pf1N1B4_3824	0.61	-0.2
4,238,835	-		Pf1N1B4_3824	0.61	+1.6
4,238,958	+		Pf1N1B4_3824	0.76	-1.9
4,239,004	+		Pf1N1B4_3824	0.82	-1.2
4,239,004	+		Pf1N1B4_3824	0.82	-0.3
4,239,004	+		Pf1N1B4_3824	0.82	-2.2
4,239,004	+		Pf1N1B4_3824	0.82	-0.6
4,239,004	+		Pf1N1B4_3824	0.82	-0.2
4,239,004	+				-0.2
4,239,005	-		Pf1N1B4_3824	0.82	+1.8
4,239,005	-		Pf1N1B4_3824	0.82	+0.5
4,239,038	+		Pf1N1B4_3824	0.86	+0.4
4,239,038	+		Pf1N1B4_3824	0.86	+1.0
4,239,038	+				+1.4
4,239,038	+		Pf1N1B4_3824	0.86	-0.7
4,239,038	+		Pf1N1B4_3824	0.86	-1.2
4,239,039	-		Pf1N1B4_3824	0.86	+1.2
4,239,063	+		Pf1N1B4_3824	0.89	+0.4
4,239,063	+		Pf1N1B4_3824	0.89	+1.0
4,239,174	+				-1.2
4,239,174	+				+2.4
4,239,174	+				-0.5
4,239,174	+				-1.5
4,239,175	-				+0.4
4,239,192	-				+0.5
4,239,193	+				+0.2
4,239,193	+				+2.1
4,239,193	+				-2.0
4,239,193	+				+0.8
4,239,193	+				+0.8
4,239,193	+				+0.1
4,239,193	+				-1.8
4,239,193	+				-0.8
4,239,193	+				+0.0
4,239,193	+				+1.8
4,239,193	+				+1.1
4,239,193	+				+0.4
4,239,193	+				-0.9
4,239,193	+				-0.5
4,239,193	+				+0.6
4,239,193	+				+0.0
4,239,193	+				+1.1
4,239,193	+				+0.4
4,239,194	-				+0.8
4,239,194	-				+1.2
4,239,194	-				+0.4
4,239,194	-				+1.4
4,239,194	-				+1.8
4,239,194	-				-1.2
4,239,196	+				+0.6
4,239,196	+				+1.4
4,239,196	+				+0.9
4,239,196	+				-0.2
4,239,197	-				+1.0