Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1239

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
1,415,959	+		Pf1N1B4_1238	0.42	-0.7
1,415,959	+		Pf1N1B4_1238	0.42	-1.4
1,415,960	-		Pf1N1B4_1238	0.42	+0.1
1,415,960	-		Pf1N1B4_1238	0.42	+0.7
1,415,960	-		Pf1N1B4_1238	0.42	-0.9
1,415,960	-				+0.7
1,416,122	+		Pf1N1B4_1238	0.53	+1.0
1,416,123	-		Pf1N1B4_1238	0.53	+1.7
1,416,123	-		Pf1N1B4_1238	0.53	+0.1
1,416,128	+		Pf1N1B4_1238	0.54	-1.0
1,416,129	-		Pf1N1B4_1238	0.54	-1.1
1,416,129	-		Pf1N1B4_1238	0.54	-0.1
1,416,129	-		Pf1N1B4_1238	0.54	-0.7
1,416,312	+		Pf1N1B4_1238	0.66	+2.1
1,416,344	+		Pf1N1B4_1238	0.68	-1.1
1,416,344	+		Pf1N1B4_1238	0.68	-1.1
1,416,344	+		Pf1N1B4_1238	0.68	-1.2
1,416,345	-		Pf1N1B4_1238	0.68	-0.7
1,416,345	-		Pf1N1B4_1238	0.68	-1.4
1,416,345	-		Pf1N1B4_1238	0.68	+1.4
1,416,384	+		Pf1N1B4_1238	0.71	+0.6
1,416,387	+				+0.1
1,416,387	+		Pf1N1B4_1238	0.71	+0.1
1,416,387	+		Pf1N1B4_1238	0.71	-0.6
1,416,388	-		Pf1N1B4_1238	0.71	-0.2
1,416,388	-		Pf1N1B4_1238	0.71	-1.4
1,416,455	+		Pf1N1B4_1238	0.76	+0.6
1,416,869	-				-0.3
1,416,869	-				-0.4
1,416,869	-				+0.1
1,416,869	-				+0.9
1,416,869	-				+0.5
1,416,869	-				+0.1
1,416,870	+				-0.4
1,416,871	-				+0.7
1,416,871	-				+0.6
1,416,871	-				-0.9
1,416,872	+				-0.3
1,416,872	+				-1.2
1,416,872	+				-1.9
1,416,872	+				+0.4
1,416,872	+				+0.1
1,416,872	+				+1.1
1,416,872	+				-0.4
1,416,872	+				+0.9
1,416,872	+				+0.9
1,416,872	+				+0.1
1,416,872	+				+2.5
1,416,872	+				+0.1
1,416,872	+				+0.1
1,416,872	+				+1.7
1,416,872	+				-1.4
1,416,872	+				-0.5
1,416,872	+				-0.9
1,416,872	+				+0.1
1,416,872	+				-0.9
1,416,872	+				+0.1
1,416,872	+				+0.0
1,416,872	+				-2.7
1,416,872	+				-1.7
1,416,873	-				-0.9
1,416,873	-				+0.7
1,416,873	-				-0.4
1,416,873	-				-0.9
1,416,873	-				+1.6
1,416,873	-				-0.6
1,416,873	-				-0.9
1,416,873	-				-0.9
1,416,873	-				-0.6
1,416,873	-				+0.1
1,416,873	-				+0.3
1,416,873	-				-0.3
1,416,873	-				+1.1
1,416,873	-				+0.1
1,416,873	-				-0.7
1,416,873	-				-1.4
1,416,873	-				-0.4
1,416,997	+				-0.9
1,416,997	+				+0.1
1,416,997	+				-1.2
1,416,998	-				-0.6
1,417,093	+		Pf1N1B4_1239	0.15	+0.1
1,417,093	+		Pf1N1B4_1239	0.15	+2.0
1,417,094	-		Pf1N1B4_1239	0.15	+1.5
1,417,097	+		Pf1N1B4_1239	0.16	-1.4
1,417,098	-		Pf1N1B4_1239	0.16	+0.9
1,417,098	-		Pf1N1B4_1239	0.16	-2.2
1,417,098	-		Pf1N1B4_1239	0.16	+0.1
1,417,098	-		Pf1N1B4_1239	0.16	+1.0
1,417,098	-		Pf1N1B4_1239	0.16	-0.4
1,417,098	-		Pf1N1B4_1239	0.16	-2.2
1,417,249	+		Pf1N1B4_1239	0.27	+0.6
1,417,249	+		Pf1N1B4_1239	0.27	+0.4
1,417,249	+		Pf1N1B4_1239	0.27	+0.7
1,417,249	+		Pf1N1B4_1239	0.27	+2.1
1,417,249	+		Pf1N1B4_1239	0.27	-0.6
1,417,250	-		Pf1N1B4_1239	0.27	+0.1
1,417,250	-		Pf1N1B4_1239	0.27	+0.6
1,417,250	-		Pf1N1B4_1239	0.27	+1.1
1,417,312	+		Pf1N1B4_1239	0.32	+0.7
1,417,312	+		Pf1N1B4_1239	0.32	+0.1
1,417,312	+		Pf1N1B4_1239	0.32	-0.6
1,417,312	+		Pf1N1B4_1239	0.32	+2.1
1,417,312	+		Pf1N1B4_1239	0.32	+0.1
1,417,312	+		Pf1N1B4_1239	0.32	-2.3
1,417,313	-		Pf1N1B4_1239	0.32	+0.1
1,417,313	-		Pf1N1B4_1239	0.32	+0.1
1,417,313	-		Pf1N1B4_1239	0.32	-0.4
1,417,313	-		Pf1N1B4_1239	0.32	+1.5
1,417,313	-		Pf1N1B4_1239	0.32	+0.1
1,417,382	+		Pf1N1B4_1239	0.37	+0.5
1,417,382	+		Pf1N1B4_1239	0.37	-1.1
1,417,382	+		Pf1N1B4_1239	0.37	+1.4
1,417,382	+		Pf1N1B4_1239	0.37	-0.6
1,417,382	+		Pf1N1B4_1239	0.37	+1.1
1,417,382	+		Pf1N1B4_1239	0.37	-0.9
1,417,383	-		Pf1N1B4_1239	0.37	+0.6
1,417,383	-		Pf1N1B4_1239	0.37	+0.7
1,417,383	-		Pf1N1B4_1239	0.37	+0.1
1,417,383	-		Pf1N1B4_1239	0.37	-1.4
1,417,383	-		Pf1N1B4_1239	0.37	-0.9
1,417,383	-		Pf1N1B4_1239	0.37	+0.7
1,417,383	-		Pf1N1B4_1239	0.37	-0.4
1,417,383	-		Pf1N1B4_1239	0.37	-1.1
1,417,511	-		Pf1N1B4_1239	0.46	+1.0
1,417,511	-		Pf1N1B4_1239	0.46	-0.1
1,417,835	-		Pf1N1B4_1239	0.70	+0.6
1,417,835	-		Pf1N1B4_1239	0.70	+2.1
1,417,982	-		Pf1N1B4_1239	0.81	+0.4
1,417,982	-		Pf1N1B4_1239	0.81	+1.1
1,418,074	+		Pf1N1B4_1239	0.88	+0.7
1,418,075	-		Pf1N1B4_1239	0.88	+1.1
1,418,165	-				+0.3
1,418,165	-				-0.1
1,418,165	-				+0.9
1,418,256	+				-2.4
1,418,290	+				+0.1
1,418,306	+				+2.0
1,418,306	+				+0.9
1,418,306	+				+1.0
1,418,608	+		Pf1N1B4_1240	0.25	-0.9
1,418,609	-		Pf1N1B4_1240	0.26	-0.9
1,418,627	+		Pf1N1B4_1240	0.27	+2.1
1,418,627	+		Pf1N1B4_1240	0.27	+1.0
1,418,628	-		Pf1N1B4_1240	0.28	-0.3
1,418,628	-		Pf1N1B4_1240	0.28	+1.7
1,418,628	-		Pf1N1B4_1240	0.28	+0.1
1,418,628	-		Pf1N1B4_1240	0.28	+0.8
1,418,628	-		Pf1N1B4_1240	0.28	-0.6
1,418,630	+		Pf1N1B4_1240	0.28	-1.0
1,418,630	+		Pf1N1B4_1240	0.28	-0.3
1,418,630	+		Pf1N1B4_1240	0.28	+0.3
1,418,630	+		Pf1N1B4_1240	0.28	-0.6
1,418,631	-		Pf1N1B4_1240	0.28	+0.1
1,418,631	-		Pf1N1B4_1240	0.28	+0.0
1,418,784	-		Pf1N1B4_1240	0.45	+0.1
1,418,784	-		Pf1N1B4_1240	0.45	+0.1
1,418,784	-		Pf1N1B4_1240	0.45	+0.5
1,418,894	-		Pf1N1B4_1240	0.56	-1.4
1,418,905	+		Pf1N1B4_1240	0.58	+1.1
1,418,905	+		Pf1N1B4_1240	0.58	+2.1
1,418,926	+		Pf1N1B4_1240	0.60	-0.2
1,418,926	+		Pf1N1B4_1240	0.60	-1.1
1,418,927	-		Pf1N1B4_1240	0.60	+1.7
1,418,927	-				+0.1
1,418,927	-		Pf1N1B4_1240	0.60	-0.3
1,418,927	-		Pf1N1B4_1240	0.60	+2.7
1,418,953	+		Pf1N1B4_1240	0.63	+0.5
1,418,953	+		Pf1N1B4_1240	0.63	+0.1
1,418,953	+		Pf1N1B4_1240	0.63	+0.6
1,418,953	+		Pf1N1B4_1240	0.63	-0.9
1,418,953	+		Pf1N1B4_1240	0.63	-0.6
1,418,954	-		Pf1N1B4_1240	0.63	-0.9
1,418,954	-		Pf1N1B4_1240	0.63	-0.3
1,418,954	-		Pf1N1B4_1240	0.63	+0.1
1,418,957	+		Pf1N1B4_1240	0.63	+0.1
1,418,957	+				-0.9
1,418,957	+		Pf1N1B4_1240	0.63	+1.7
1,418,958	-		Pf1N1B4_1240	0.63	-0.3
1,418,958	-		Pf1N1B4_1240	0.63	+0.5
1,418,958	-		Pf1N1B4_1240	0.63	-0.4
1,418,958	-				-0.9
1,418,958	-		Pf1N1B4_1240	0.63	+0.9
1,419,046	+		Pf1N1B4_1240	0.73	-1.0
1,419,047	-				+1.1
1,419,118	+		Pf1N1B4_1240	0.81	-0.6
1,419,118	+		Pf1N1B4_1240	0.81	-0.3
1,419,118	+		Pf1N1B4_1240	0.81	-1.9
1,419,127	+		Pf1N1B4_1240	0.82	-1.2
1,419,142	+		Pf1N1B4_1240	0.83	+1.7
1,419,202	+		Pf1N1B4_1240	0.90	-0.3
1,419,203	-				+0.1