Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06530

Experiment: Temperature shift 30_to_10; with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Temperature shift 30_to_10; with MOPS
1,458,247	+				-0.0
1,458,290	+				+0.6
1,458,290	+				+0.4
1,458,290	+				-0.5
1,458,291	-				-1.2
1,458,291	-				+0.7
1,458,291	-				+0.2
1,458,291	-				-0.4
1,458,356	+				-1.0
1,458,356	+				+0.2
1,458,356	+				+2.9
1,458,357	-				-0.5
1,458,357	-				-1.3
1,458,357	-				-0.5
1,458,380	+				-1.2
1,458,380	+				-0.6
1,458,381	-				-0.2
1,458,381	-				+1.8
1,458,381	-				+0.4
1,458,381	-				-0.8
1,458,482	-		PFLU_RS06525	0.21	+0.1
1,458,526	+		PFLU_RS06525	0.28	+0.4
1,458,526	+		PFLU_RS06525	0.28	-0.2
1,458,527	-		PFLU_RS06525	0.28	-0.2
1,458,527	-		PFLU_RS06525	0.28	+0.9
1,458,527	-		PFLU_RS06525	0.28	+0.5
1,458,585	+		PFLU_RS06525	0.36	+0.8
1,458,585	+		PFLU_RS06525	0.36	-0.2
1,458,585	+		PFLU_RS06525	0.36	+0.2
1,458,586	-		PFLU_RS06525	0.36	-1.8
1,458,586	-		PFLU_RS06525	0.36	-1.1
1,458,617	+		PFLU_RS06525	0.41	+0.2
1,458,617	+		PFLU_RS06525	0.41	-1.1
1,458,617	+		PFLU_RS06525	0.41	+0.4
1,458,617	+		PFLU_RS06525	0.41	+0.5
1,458,617	+		PFLU_RS06525	0.41	-0.1
1,458,617	+		PFLU_RS06525	0.41	+0.2
1,458,617	+		PFLU_RS06525	0.41	-1.6
1,458,617	+		PFLU_RS06525	0.41	+0.8
1,458,617	+		PFLU_RS06525	0.41	-0.4
1,458,617	+		PFLU_RS06525	0.41	-0.4
1,458,617	+		PFLU_RS06525	0.41	+0.5
1,458,617	+		PFLU_RS06525	0.41	+0.6
1,458,617	+		PFLU_RS06525	0.41	-0.2
1,458,617	+		PFLU_RS06525	0.41	+0.4
1,458,617	+		PFLU_RS06525	0.41	+1.8
1,458,617	+		PFLU_RS06525	0.41	-2.1
1,458,617	+		PFLU_RS06525	0.41	-0.2
1,458,617	+		PFLU_RS06525	0.41	-0.4
1,458,617	+		PFLU_RS06525	0.41	+1.7
1,458,618	-		PFLU_RS06525	0.41	-1.8
1,458,618	-		PFLU_RS06525	0.41	+1.2
1,458,618	-		PFLU_RS06525	0.41	-1.2
1,458,618	-		PFLU_RS06525	0.41	-0.1
1,458,618	-		PFLU_RS06525	0.41	+0.9
1,458,618	-		PFLU_RS06525	0.41	+0.9
1,458,618	-		PFLU_RS06525	0.41	+0.9
1,458,618	-		PFLU_RS06525	0.41	+0.4
1,458,618	-		PFLU_RS06525	0.41	-0.4
1,458,618	-		PFLU_RS06525	0.41	-1.0
1,458,618	-		PFLU_RS06525	0.41	-2.5
1,458,618	-		PFLU_RS06525	0.41	-0.5
1,458,748	-		PFLU_RS06525	0.59	-0.3
1,458,847	+		PFLU_RS06525	0.74	+1.4
1,458,847	+		PFLU_RS06525	0.74	+0.0
1,458,847	+		PFLU_RS06525	0.74	-0.9
1,458,847	+		PFLU_RS06525	0.74	-0.6
1,458,847	+		PFLU_RS06525	0.74	-0.9
1,458,847	+		PFLU_RS06525	0.74	-0.3
1,458,847	+		PFLU_RS06525	0.74	+0.1
1,458,847	+		PFLU_RS06525	0.74	-1.5
1,458,847	+		PFLU_RS06525	0.74	-0.4
1,458,847	+		PFLU_RS06525	0.74	-0.2
1,458,847	+		PFLU_RS06525	0.74	-0.1
1,458,847	+		PFLU_RS06525	0.74	-0.3
1,458,848	-		PFLU_RS06525	0.74	+0.0
1,458,848	-		PFLU_RS06525	0.74	-0.4
1,458,848	-		PFLU_RS06525	0.74	-0.2
1,458,848	-		PFLU_RS06525	0.74	-1.6
1,458,848	-		PFLU_RS06525	0.74	+0.0
1,458,848	-		PFLU_RS06525	0.74	-0.8
1,458,848	-		PFLU_RS06525	0.74	+0.6
1,458,848	-		PFLU_RS06525	0.74	+1.0
1,458,848	-		PFLU_RS06525	0.74	+1.4
1,458,848	-		PFLU_RS06525	0.74	+0.2
1,458,848	-		PFLU_RS06525	0.74	+0.5
1,458,848	-		PFLU_RS06525	0.74	+0.5
1,458,848	-		PFLU_RS06525	0.74	-2.0
1,458,848	-		PFLU_RS06525	0.74	+0.4
1,458,848	-		PFLU_RS06525	0.74	+0.7
1,458,848	-		PFLU_RS06525	0.74	-0.5
1,458,848	-		PFLU_RS06525	0.74	+0.2
1,458,893	-		PFLU_RS06525	0.80	-0.1
1,458,893	-		PFLU_RS06525	0.80	+0.0
1,459,083	+				-1.0
1,459,083	+				-1.0
1,459,083	+				-2.1
1,459,083	+				+0.4
1,459,084	-				-2.7
1,459,084	-				+0.1
1,459,084	-				+0.5
1,459,084	-				+0.2
1,459,084	-				-0.6
1,459,084	-				-0.2
1,459,086	+				-2.0
1,459,086	+				+1.5
1,459,087	-				+1.2
1,459,087	-				+0.4
1,459,130	+				-0.6
1,459,131	-				+0.0
1,459,159	+				-0.2
1,459,159	+				+0.0
1,459,159	+				-1.2
1,459,160	-				+0.6
1,459,160	-				-1.0
1,459,182	+				-2.5
1,459,183	-				-0.3
1,459,183	-				+0.6
1,459,183	-				+1.7
1,459,286	+		PFLU_RS06530	0.14	+0.1
1,459,287	-		PFLU_RS06530	0.14	-0.3
1,459,287	-		PFLU_RS06530	0.14	-0.6
1,459,595	-		PFLU_RS06530	0.55	-1.0
1,459,595	-		PFLU_RS06530	0.55	-1.6
1,459,672	-		PFLU_RS06530	0.65	-0.4
1,459,840	+		PFLU_RS06530	0.87	-0.4
1,459,841	-		PFLU_RS06530	0.87	-0.8
1,459,933	+				+1.2
1,459,933	+				-0.3
1,459,934	-				-0.3
1,459,934	-				-0.2
1,460,026	+				+0.4
1,460,026	+				+1.8
1,460,026	+				+0.8
1,460,026	+				-1.3
1,460,027	-				-0.1
1,460,027	-				+0.6
1,460,224	+		PFLU_RS06535	0.40	+1.4
1,460,224	+		PFLU_RS06535	0.40	+2.0
1,460,224	+		PFLU_RS06535	0.40	+2.7
1,460,224	+		PFLU_RS06535	0.40	-1.4
1,460,225	-		PFLU_RS06535	0.40	-0.1
1,460,225	-		PFLU_RS06535	0.40	-1.2
1,460,225	-		PFLU_RS06535	0.40	+1.8
1,460,225	-		PFLU_RS06535	0.40	-1.2
1,460,225	-		PFLU_RS06535	0.40	-1.4
1,460,248	+		PFLU_RS06535	0.45	+1.4
1,460,248	+		PFLU_RS06535	0.45	-0.0
1,460,248	+		PFLU_RS06535	0.45	+1.0
1,460,248	+		PFLU_RS06535	0.45	+0.8
1,460,248	+		PFLU_RS06535	0.45	+2.4
1,460,248	+		PFLU_RS06535	0.45	+0.6
1,460,248	+		PFLU_RS06535	0.45	-0.2
1,460,248	+		PFLU_RS06535	0.45	+0.0
1,460,249	-		PFLU_RS06535	0.46	-0.0
1,460,249	-		PFLU_RS06535	0.46	-1.1
1,460,249	-		PFLU_RS06535	0.46	+0.4
1,460,249	-		PFLU_RS06535	0.46	+0.4
1,460,249	-		PFLU_RS06535	0.46	-0.2
1,460,249	-		PFLU_RS06535	0.46	-0.5
1,460,249	-		PFLU_RS06535	0.46	-0.0
1,460,249	-		PFLU_RS06535	0.46	-2.4
1,460,249	-		PFLU_RS06535	0.46	+0.7
1,460,249	-		PFLU_RS06535	0.46	-0.2
1,460,249	-		PFLU_RS06535	0.46	-0.3
1,460,439	-		PFLU_RS06535	0.86	+1.0
1,460,466	+				-1.0
1,460,466	+				-2.0
1,460,466	+				-0.6
1,460,466	+				+0.0
1,460,466	+				-1.0
1,460,466	+				+0.4
1,460,466	+				+1.4
1,460,466	+				+0.0
1,460,466	+				-0.1
1,460,466	+				-1.2
1,460,466	+				-1.2
1,460,467	-				+0.5
1,460,467	-				-0.1
1,460,467	-				-3.8
1,460,467	-				+0.1
1,460,467	-				+0.2
1,460,467	-				-0.0
1,460,467	-				+1.5
1,460,467	-				+0.5
1,460,467	-				+0.9
1,460,467	-				+0.2
1,460,467	-				+0.5
1,460,467	-				+0.1
1,460,479	+				-0.4
1,460,479	+				-0.0
1,460,479	+				-1.3
1,460,479	+				-0.6
1,460,479	+				+1.4
1,460,479	+				+0.3
1,460,479	+				+1.3
1,460,479	+				+0.2
1,460,479	+				-0.6
1,460,480	-				-1.6
1,460,480	-				-1.7
1,460,480	-				+1.1
1,460,480	-				+0.2
1,460,480	-				+0.1
1,460,480	-				-0.6
1,460,480	-				+1.0
1,460,490	-				+0.0
1,460,490	-				-1.0
1,460,507	+				-0.1
1,460,508	-				+0.0
1,460,527	+				-2.4
1,460,527	+				-0.4
1,460,527	+				-0.6
1,460,528	-				+0.6
1,460,528	-				+0.1
1,460,528	-				-1.1
1,460,528	-				+0.8
1,460,532	-				-0.2
1,460,539	+				-0.4
1,460,539	+				-0.4
1,460,540	-				+0.8
1,460,540	-				+0.4
1,460,540	-				-0.0
1,460,544	+				+0.8
1,460,640	+				+0.8
1,460,640	+				+1.4
1,460,641	-				-1.1
1,460,641	-				-1.8
1,460,641	-				+0.0
1,460,641	-				-1.6
1,460,641	-				+0.4
1,460,641	-				+0.8
1,460,679	+				+0.8
1,460,815	-				+0.7
1,460,815	-				+0.7
1,460,904	+		PFLU_RS06540	0.14	-0.1
1,460,905	-		PFLU_RS06540	0.14	-1.4