Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06102 and H281DRAFT_06103 are separated by 1 nucleotides H281DRAFT_06103 and H281DRAFT_06104 overlap by 4 nucleotides H281DRAFT_06104 and H281DRAFT_06105 are separated by 37 nucleotides
H281DRAFT_06102: H281DRAFT_06102 - peptide/nickel transport system permease protein, at 122,374 to 123,288
_06102
H281DRAFT_06103: H281DRAFT_06103 - peptide/nickel transport system ATP-binding protein, at 123,290 to 124,180
_06103
H281DRAFT_06104: H281DRAFT_06104 - peptide/nickel transport system ATP-binding protein, at 124,177 to 124,944
_06104
H281DRAFT_06105: H281DRAFT_06105 - transcriptional regulator, GntR family, at 124,982 to 126,085
_06105
Position (kb) 124
125 Strain fitness (log2 ratio) -2
-1
0
1 at 123.946 kb on + strand, within H281DRAFT_06103 at 123.998 kb on + strand, within H281DRAFT_06103 at 124.177 kb on - strand at 124.479 kb on - strand, within H281DRAFT_06104 at 124.483 kb on - strand, within H281DRAFT_06104 at 124.536 kb on - strand, within H281DRAFT_06104 at 124.536 kb on - strand, within H281DRAFT_06104 at 124.829 kb on + strand, within H281DRAFT_06104 at 124.905 kb on + strand at 124.983 kb on + strand at 125.001 kb on + strand at 125.005 kb on + strand at 125.005 kb on + strand at 125.219 kb on - strand, within H281DRAFT_06105 at 125.219 kb on - strand, within H281DRAFT_06105 at 125.302 kb on - strand, within H281DRAFT_06105 at 125.302 kb on - strand, within H281DRAFT_06105 at 125.423 kb on + strand, within H281DRAFT_06105 at 125.440 kb on - strand, within H281DRAFT_06105 at 125.900 kb on - strand, within H281DRAFT_06105
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 123,946 + H281DRAFT_06103 0.74 -0.3 123,998 + H281DRAFT_06103 0.79 +0.3 124,177 - -0.6 124,479 - H281DRAFT_06104 0.39 -0.4 124,483 - H281DRAFT_06104 0.40 -0.2 124,536 - H281DRAFT_06104 0.47 +0.2 124,536 - H281DRAFT_06104 0.47 +1.0 124,829 + H281DRAFT_06104 0.85 +0.1 124,905 + +0.1 124,983 + +0.6 125,001 + -0.2 125,005 + -0.1 125,005 + -1.6 125,219 - H281DRAFT_06105 0.21 -2.2 125,219 - H281DRAFT_06105 0.21 +0.9 125,302 - H281DRAFT_06105 0.29 -0.2 125,302 - H281DRAFT_06105 0.29 -1.9 125,423 + H281DRAFT_06105 0.40 -0.9 125,440 - H281DRAFT_06105 0.41 -0.3 125,900 - H281DRAFT_06105 0.83 -1.4
Or see this region's nucleotide sequence