Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03927

Experiment: 2'-Deoxyinosine 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03926 and H281DRAFT_03927 are separated by 294 nucleotidesH281DRAFT_03927 and H281DRAFT_03928 are separated by 121 nucleotides H281DRAFT_03926: H281DRAFT_03926 - phosphoserine aminotransferase apoenzyme, at 22,910 to 23,992 _03926 H281DRAFT_03927: H281DRAFT_03927 - hypothetical protein, at 24,287 to 24,889 _03927 H281DRAFT_03928: H281DRAFT_03928 - DNA gyrase subunit A, at 25,011 to 27,599 _03928 Position (kb) 24 25Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 23.287 kb on - strand, within H281DRAFT_03926at 23.287 kb on - strand, within H281DRAFT_03926at 23.434 kb on - strand, within H281DRAFT_03926at 23.434 kb on - strand, within H281DRAFT_03926at 23.434 kb on - strand, within H281DRAFT_03926at 23.434 kb on - strand, within H281DRAFT_03926at 23.563 kb on - strand, within H281DRAFT_03926at 23.563 kb on - strand, within H281DRAFT_03926at 23.563 kb on - strand, within H281DRAFT_03926at 23.659 kb on - strand, within H281DRAFT_03926at 24.289 kb on - strandat 24.289 kb on - strandat 24.293 kb on - strandat 24.894 kb on - strandat 24.957 kb on - strandat 24.957 kb on - strandat 24.957 kb on - strandat 24.957 kb on - strandat 24.957 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C)
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23,287 - H281DRAFT_03926 0.35 -4.7
23,287 - H281DRAFT_03926 0.35 -4.5
23,434 - H281DRAFT_03926 0.48 -4.3
23,434 - H281DRAFT_03926 0.48 -3.4
23,434 - H281DRAFT_03926 0.48 -5.1
23,434 - H281DRAFT_03926 0.48 -4.4
23,563 - H281DRAFT_03926 0.60 -3.2
23,563 - H281DRAFT_03926 0.60 -3.6
23,563 - H281DRAFT_03926 0.60 -4.3
23,659 - H281DRAFT_03926 0.69 -2.8
24,289 - +0.5
24,289 - +0.1
24,293 - -1.4
24,894 - -4.5
24,957 - +0.3
24,957 - +0.5
24,957 - +0.9
24,957 - -1.3
24,957 - -0.8

Or see this region's nucleotide sequence