Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03471 and H281DRAFT_03472 are separated by 349 nucleotides H281DRAFT_03472 and H281DRAFT_03473 are separated by 154 nucleotides H281DRAFT_03473 and H281DRAFT_03474 are separated by 289 nucleotides H281DRAFT_03474 and H281DRAFT_03475 are separated by 5 nucleotides
H281DRAFT_03471: H281DRAFT_03471 - Carboxypeptidase C (cathepsin A), at 554,557 to 556,212
_03471
H281DRAFT_03472: H281DRAFT_03472 - hypothetical protein, at 556,562 to 557,014
_03472
H281DRAFT_03473: H281DRAFT_03473 - hypothetical protein, at 557,169 to 557,528
_03473
H281DRAFT_03474: H281DRAFT_03474 - hypothetical protein, at 557,818 to 557,964
_03474
H281DRAFT_03475: H281DRAFT_03475 - hypothetical protein, at 557,970 to 558,236
_03475
Position (kb) 556
557
558 Strain fitness (log2 ratio) -2
-1
0
1 at 555.593 kb on + strand, within H281DRAFT_03471 at 555.640 kb on + strand, within H281DRAFT_03471 at 555.739 kb on + strand, within H281DRAFT_03471 at 555.760 kb on + strand, within H281DRAFT_03471 at 555.760 kb on + strand, within H281DRAFT_03471 at 555.781 kb on + strand, within H281DRAFT_03471 at 555.782 kb on - strand, within H281DRAFT_03471 at 555.899 kb on + strand, within H281DRAFT_03471 at 555.899 kb on + strand, within H281DRAFT_03471 at 555.899 kb on + strand, within H281DRAFT_03471 at 555.901 kb on + strand, within H281DRAFT_03471 at 555.901 kb on + strand, within H281DRAFT_03471 at 555.994 kb on + strand, within H281DRAFT_03471 at 555.994 kb on + strand, within H281DRAFT_03471 at 555.995 kb on - strand, within H281DRAFT_03471 at 556.141 kb on + strand at 556.141 kb on + strand at 556.179 kb on + strand at 556.211 kb on - strand at 556.346 kb on + strand at 556.428 kb on + strand at 556.428 kb on + strand at 556.428 kb on + strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.432 kb on + strand at 556.433 kb on - strand at 556.606 kb on - strand at 556.620 kb on - strand, within H281DRAFT_03472 at 557.152 kb on - strand at 557.242 kb on + strand, within H281DRAFT_03473 at 557.242 kb on + strand, within H281DRAFT_03473 at 557.328 kb on + strand, within H281DRAFT_03473 at 557.398 kb on + strand, within H281DRAFT_03473 at 557.399 kb on - strand, within H281DRAFT_03473 at 557.571 kb on - strand at 557.703 kb on + strand at 557.704 kb on - strand at 557.704 kb on - strand at 557.830 kb on + strand at 557.830 kb on + strand at 557.830 kb on + strand at 557.831 kb on - strand at 557.831 kb on - strand at 557.831 kb on - strand at 557.949 kb on + strand, within H281DRAFT_03474 at 557.950 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 555,593 + H281DRAFT_03471 0.63 +0.6 555,640 + H281DRAFT_03471 0.65 +1.1 555,739 + H281DRAFT_03471 0.71 -0.5 555,760 + H281DRAFT_03471 0.73 +0.2 555,760 + H281DRAFT_03471 0.73 -0.5 555,781 + H281DRAFT_03471 0.74 -0.4 555,782 - H281DRAFT_03471 0.74 +0.8 555,899 + H281DRAFT_03471 0.81 -0.5 555,899 + H281DRAFT_03471 0.81 -0.8 555,899 + H281DRAFT_03471 0.81 +0.6 555,901 + H281DRAFT_03471 0.81 -1.2 555,901 + H281DRAFT_03471 0.81 +0.1 555,994 + H281DRAFT_03471 0.87 -0.3 555,994 + H281DRAFT_03471 0.87 -0.8 555,995 - H281DRAFT_03471 0.87 +0.8 556,141 + -1.2 556,141 + -1.7 556,179 + -0.8 556,211 - +0.1 556,346 + -0.9 556,428 + +1.4 556,428 + -0.0 556,428 + +0.6 556,429 - +0.5 556,429 - +1.0 556,429 - +0.0 556,429 - +0.6 556,429 - +0.9 556,429 - +0.7 556,429 - -0.9 556,432 + +0.8 556,433 - +0.3 556,606 - +1.2 556,620 - H281DRAFT_03472 0.13 +0.4 557,152 - +0.8 557,242 + H281DRAFT_03473 0.20 +1.2 557,242 + H281DRAFT_03473 0.20 +0.6 557,328 + H281DRAFT_03473 0.44 -0.4 557,398 + H281DRAFT_03473 0.64 +0.3 557,399 - H281DRAFT_03473 0.64 +0.4 557,571 - +0.0 557,703 + -0.6 557,704 - +0.7 557,704 - +0.6 557,830 + +1.5 557,830 + +0.5 557,830 + +0.5 557,831 - +0.1 557,831 - -2.4 557,831 - +0.3 557,949 + H281DRAFT_03474 0.89 -0.4 557,950 - -0.2
Or see this region's nucleotide sequence