Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03018 and H281DRAFT_03019 are separated by 217 nucleotides H281DRAFT_03019 and H281DRAFT_03020 are separated by 217 nucleotides H281DRAFT_03020 and H281DRAFT_03021 are separated by 29 nucleotides
H281DRAFT_03018: H281DRAFT_03018 - Threonine/homoserine/homoserine lactone efflux protein, at 46,685 to 47,305
_03018
H281DRAFT_03019: H281DRAFT_03019 - hypothetical protein, at 47,523 to 48,062
_03019
H281DRAFT_03020: H281DRAFT_03020 - uncharacterized protein, YigZ family, at 48,280 to 49,002
_03020
H281DRAFT_03021: H281DRAFT_03021 - Threonine/homoserine/homoserine lactone efflux protein, at 49,032 to 49,658
_03021
Position (kb) 47
48
49 Strain fitness (log2 ratio) -2
-1
0
1
2 at 46.526 kb on + strand at 46.527 kb on - strand at 46.527 kb on - strand at 46.617 kb on - strand at 46.812 kb on + strand, within H281DRAFT_03018 at 46.812 kb on + strand, within H281DRAFT_03018 at 46.813 kb on - strand, within H281DRAFT_03018 at 46.918 kb on + strand, within H281DRAFT_03018 at 47.005 kb on + strand, within H281DRAFT_03018 at 47.036 kb on + strand, within H281DRAFT_03018 at 47.037 kb on - strand, within H281DRAFT_03018 at 47.037 kb on - strand, within H281DRAFT_03018 at 47.037 kb on - strand, within H281DRAFT_03018 at 47.690 kb on - strand, within H281DRAFT_03019 at 47.920 kb on + strand, within H281DRAFT_03019 at 47.921 kb on - strand, within H281DRAFT_03019 at 47.987 kb on + strand, within H281DRAFT_03019 at 48.190 kb on + strand at 48.191 kb on - strand at 48.200 kb on + strand at 48.200 kb on + strand at 48.201 kb on - strand at 48.201 kb on - strand at 48.201 kb on - strand at 48.225 kb on + strand at 48.281 kb on + strand at 48.316 kb on + strand at 48.316 kb on + strand at 48.404 kb on + strand, within H281DRAFT_03020 at 48.405 kb on - strand, within H281DRAFT_03020 at 48.449 kb on + strand, within H281DRAFT_03020 at 48.532 kb on - strand, within H281DRAFT_03020 at 48.532 kb on - strand, within H281DRAFT_03020 at 48.534 kb on - strand, within H281DRAFT_03020 at 48.576 kb on - strand, within H281DRAFT_03020 at 48.586 kb on + strand, within H281DRAFT_03020 at 48.854 kb on + strand, within H281DRAFT_03020 at 48.854 kb on + strand, within H281DRAFT_03020 at 48.854 kb on + strand, within H281DRAFT_03020 at 48.962 kb on - strand at 48.962 kb on - strand at 48.977 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 46,526 + -1.3 46,527 - +0.5 46,527 - -0.2 46,617 - -0.6 46,812 + H281DRAFT_03018 0.20 -2.0 46,812 + H281DRAFT_03018 0.20 -0.5 46,813 - H281DRAFT_03018 0.21 +0.6 46,918 + H281DRAFT_03018 0.38 -0.5 47,005 + H281DRAFT_03018 0.52 +0.4 47,036 + H281DRAFT_03018 0.57 -0.1 47,037 - H281DRAFT_03018 0.57 -1.3 47,037 - H281DRAFT_03018 0.57 +0.1 47,037 - H281DRAFT_03018 0.57 +2.1 47,690 - H281DRAFT_03019 0.31 +0.7 47,920 + H281DRAFT_03019 0.74 +0.8 47,921 - H281DRAFT_03019 0.74 +0.5 47,987 + H281DRAFT_03019 0.86 +0.7 48,190 + +1.0 48,191 - -1.3 48,200 + -0.1 48,200 + +0.1 48,201 - -0.3 48,201 - -0.1 48,201 - +0.7 48,225 + -0.2 48,281 + +1.1 48,316 + -0.2 48,316 + -0.2 48,404 + H281DRAFT_03020 0.17 -0.3 48,405 - H281DRAFT_03020 0.17 -0.3 48,449 + H281DRAFT_03020 0.23 -2.1 48,532 - H281DRAFT_03020 0.35 -0.4 48,532 - H281DRAFT_03020 0.35 +0.3 48,534 - H281DRAFT_03020 0.35 +0.9 48,576 - H281DRAFT_03020 0.41 +0.0 48,586 + H281DRAFT_03020 0.42 -1.4 48,854 + H281DRAFT_03020 0.79 +0.4 48,854 + H281DRAFT_03020 0.79 +0.2 48,854 + H281DRAFT_03020 0.79 -0.4 48,962 - -0.1 48,962 - -1.9 48,977 - -0.4
Or see this region's nucleotide sequence