Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02143 and H281DRAFT_02144 are separated by 96 nucleotides H281DRAFT_02144 and H281DRAFT_02145 are separated by 281 nucleotides H281DRAFT_02145 and H281DRAFT_02146 are separated by 349 nucleotides
H281DRAFT_02143: H281DRAFT_02143 - hypothetical protein, at 283,981 to 285,534
_02143
H281DRAFT_02144: H281DRAFT_02144 - hypothetical protein, at 285,631 to 287,049
_02144
H281DRAFT_02145: H281DRAFT_02145 - hypothetical protein, at 287,331 to 287,441
_02145
H281DRAFT_02146: H281DRAFT_02146 - Integrase, at 287,791 to 289,005
_02146
Position (kb) 285
286
287
288 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 284.640 kb on - strand, within H281DRAFT_02143 at 284.741 kb on - strand, within H281DRAFT_02143 at 284.788 kb on + strand, within H281DRAFT_02143 at 284.789 kb on - strand, within H281DRAFT_02143 at 284.824 kb on + strand, within H281DRAFT_02143 at 284.825 kb on - strand, within H281DRAFT_02143 at 284.914 kb on - strand, within H281DRAFT_02143 at 284.940 kb on + strand, within H281DRAFT_02143 at 284.941 kb on - strand, within H281DRAFT_02143 at 284.941 kb on - strand, within H281DRAFT_02143 at 284.977 kb on + strand, within H281DRAFT_02143 at 285.084 kb on + strand, within H281DRAFT_02143 at 285.109 kb on + strand, within H281DRAFT_02143 at 285.115 kb on + strand, within H281DRAFT_02143 at 285.115 kb on + strand, within H281DRAFT_02143 at 285.116 kb on - strand, within H281DRAFT_02143 at 285.118 kb on + strand, within H281DRAFT_02143 at 285.119 kb on - strand, within H281DRAFT_02143 at 285.138 kb on + strand, within H281DRAFT_02143 at 285.145 kb on + strand, within H281DRAFT_02143 at 285.145 kb on + strand, within H281DRAFT_02143 at 285.146 kb on - strand, within H281DRAFT_02143 at 285.172 kb on + strand, within H281DRAFT_02143 at 285.283 kb on + strand, within H281DRAFT_02143 at 285.283 kb on + strand, within H281DRAFT_02143 at 285.284 kb on - strand, within H281DRAFT_02143 at 285.391 kb on + strand at 285.391 kb on + strand at 285.460 kb on + strand at 285.461 kb on - strand at 285.485 kb on - strand at 285.485 kb on - strand at 285.485 kb on - strand at 285.485 kb on - strand at 285.485 kb on - strand at 285.598 kb on + strand at 285.598 kb on + strand at 285.598 kb on + strand at 285.598 kb on + strand at 285.599 kb on - strand at 285.599 kb on - strand at 285.599 kb on - strand at 285.599 kb on - strand at 285.599 kb on - strand at 285.599 kb on - strand at 285.618 kb on + strand at 285.618 kb on + strand at 285.618 kb on + strand at 285.637 kb on - strand at 285.637 kb on - strand at 285.637 kb on - strand at 285.712 kb on + strand at 285.718 kb on + strand at 285.719 kb on - strand at 285.736 kb on + strand at 285.737 kb on - strand at 285.737 kb on - strand at 285.801 kb on + strand, within H281DRAFT_02144 at 285.813 kb on + strand, within H281DRAFT_02144 at 285.813 kb on + strand, within H281DRAFT_02144 at 285.896 kb on - strand, within H281DRAFT_02144 at 285.896 kb on - strand, within H281DRAFT_02144 at 285.896 kb on - strand, within H281DRAFT_02144 at 285.963 kb on + strand, within H281DRAFT_02144 at 285.965 kb on + strand, within H281DRAFT_02144 at 286.004 kb on - strand, within H281DRAFT_02144 at 286.004 kb on - strand, within H281DRAFT_02144 at 286.212 kb on + strand, within H281DRAFT_02144 at 286.212 kb on + strand, within H281DRAFT_02144 at 286.212 kb on + strand, within H281DRAFT_02144 at 286.212 kb on + strand, within H281DRAFT_02144 at 286.212 kb on + strand, within H281DRAFT_02144 at 286.213 kb on - strand, within H281DRAFT_02144 at 286.213 kb on - strand, within H281DRAFT_02144 at 286.230 kb on + strand, within H281DRAFT_02144 at 286.230 kb on + strand, within H281DRAFT_02144 at 286.230 kb on + strand, within H281DRAFT_02144 at 286.230 kb on + strand, within H281DRAFT_02144 at 286.231 kb on - strand, within H281DRAFT_02144 at 286.234 kb on + strand, within H281DRAFT_02144 at 286.234 kb on + strand, within H281DRAFT_02144 at 286.235 kb on - strand, within H281DRAFT_02144 at 286.235 kb on - strand, within H281DRAFT_02144 at 286.235 kb on - strand, within H281DRAFT_02144 at 286.235 kb on - strand, within H281DRAFT_02144 at 286.289 kb on + strand, within H281DRAFT_02144 at 286.289 kb on + strand, within H281DRAFT_02144 at 286.380 kb on + strand, within H281DRAFT_02144 at 286.380 kb on + strand, within H281DRAFT_02144 at 286.380 kb on + strand, within H281DRAFT_02144 at 286.381 kb on - strand, within H281DRAFT_02144 at 286.381 kb on - strand, within H281DRAFT_02144 at 286.684 kb on + strand, within H281DRAFT_02144 at 286.909 kb on + strand at 286.909 kb on + strand at 286.909 kb on + strand at 286.909 kb on + strand at 286.961 kb on + strand at 286.961 kb on + strand at 286.961 kb on + strand at 286.962 kb on - strand at 287.049 kb on + strand at 287.050 kb on - strand at 287.050 kb on - strand at 287.107 kb on + strand at 287.141 kb on + strand at 287.163 kb on + strand at 287.264 kb on - strand at 287.304 kb on + strand at 287.320 kb on - strand at 287.393 kb on - strand, within H281DRAFT_02145 at 287.559 kb on + strand at 287.559 kb on + strand at 287.559 kb on + strand at 287.560 kb on - strand at 287.560 kb on - strand at 287.560 kb on - strand at 287.560 kb on - strand at 287.560 kb on - strand at 287.583 kb on + strand at 287.653 kb on + strand at 287.653 kb on + strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.662 kb on - strand at 287.662 kb on - strand at 287.662 kb on - strand at 287.739 kb on + strand at 287.740 kb on - strand at 287.775 kb on + strand at 287.850 kb on - strand at 287.850 kb on - strand at 287.906 kb on + strand at 287.906 kb on + strand at 287.906 kb on + strand at 287.907 kb on - strand at 287.907 kb on - strand at 287.907 kb on - strand at 287.913 kb on + strand, within H281DRAFT_02146 at 287.914 kb on - strand, within H281DRAFT_02146
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 284,640 - H281DRAFT_02143 0.42 +0.5 284,741 - H281DRAFT_02143 0.49 -1.2 284,788 + H281DRAFT_02143 0.52 +0.4 284,789 - H281DRAFT_02143 0.52 +0.5 284,824 + H281DRAFT_02143 0.54 +0.7 284,825 - H281DRAFT_02143 0.54 -0.5 284,914 - H281DRAFT_02143 0.60 -0.5 284,940 + H281DRAFT_02143 0.62 +0.1 284,941 - H281DRAFT_02143 0.62 +0.2 284,941 - H281DRAFT_02143 0.62 -0.7 284,977 + H281DRAFT_02143 0.64 +0.2 285,084 + H281DRAFT_02143 0.71 -0.1 285,109 + H281DRAFT_02143 0.73 -0.2 285,115 + H281DRAFT_02143 0.73 -0.5 285,115 + H281DRAFT_02143 0.73 +0.3 285,116 - H281DRAFT_02143 0.73 -0.0 285,118 + H281DRAFT_02143 0.73 -0.1 285,119 - H281DRAFT_02143 0.73 -0.6 285,138 + H281DRAFT_02143 0.74 -0.8 285,145 + H281DRAFT_02143 0.75 +0.2 285,145 + H281DRAFT_02143 0.75 +0.0 285,146 - H281DRAFT_02143 0.75 -1.6 285,172 + H281DRAFT_02143 0.77 +0.8 285,283 + H281DRAFT_02143 0.84 +0.2 285,283 + H281DRAFT_02143 0.84 -0.1 285,284 - H281DRAFT_02143 0.84 +0.5 285,391 + +0.1 285,391 + +1.2 285,460 + -1.2 285,461 - -2.2 285,485 - +0.4 285,485 - +1.3 285,485 - +0.3 285,485 - +2.8 285,485 - +0.6 285,598 + +0.1 285,598 + -0.2 285,598 + -1.0 285,598 + +0.6 285,599 - -0.2 285,599 - -0.8 285,599 - -0.5 285,599 - +1.6 285,599 - +0.7 285,599 - +0.3 285,618 + -0.1 285,618 + -1.5 285,618 + +0.7 285,637 - +0.4 285,637 - +0.7 285,637 - -1.8 285,712 + -3.2 285,718 + -0.7 285,719 - +1.0 285,736 + -0.3 285,737 - +0.5 285,737 - -0.1 285,801 + H281DRAFT_02144 0.12 +0.3 285,813 + H281DRAFT_02144 0.13 -0.4 285,813 + H281DRAFT_02144 0.13 +0.0 285,896 - H281DRAFT_02144 0.19 +0.6 285,896 - H281DRAFT_02144 0.19 +0.7 285,896 - H281DRAFT_02144 0.19 +0.1 285,963 + H281DRAFT_02144 0.23 +0.1 285,965 + H281DRAFT_02144 0.24 +0.4 286,004 - H281DRAFT_02144 0.26 -0.6 286,004 - H281DRAFT_02144 0.26 -0.3 286,212 + H281DRAFT_02144 0.41 -0.0 286,212 + H281DRAFT_02144 0.41 -0.4 286,212 + H281DRAFT_02144 0.41 +1.5 286,212 + H281DRAFT_02144 0.41 -0.1 286,212 + H281DRAFT_02144 0.41 -0.3 286,213 - H281DRAFT_02144 0.41 -2.7 286,213 - H281DRAFT_02144 0.41 +0.6 286,230 + H281DRAFT_02144 0.42 -0.0 286,230 + H281DRAFT_02144 0.42 -0.8 286,230 + H281DRAFT_02144 0.42 +0.1 286,230 + H281DRAFT_02144 0.42 +0.8 286,231 - H281DRAFT_02144 0.42 -1.2 286,234 + H281DRAFT_02144 0.42 -2.3 286,234 + H281DRAFT_02144 0.42 +0.9 286,235 - H281DRAFT_02144 0.43 +0.3 286,235 - H281DRAFT_02144 0.43 +0.2 286,235 - H281DRAFT_02144 0.43 +0.2 286,235 - H281DRAFT_02144 0.43 +1.1 286,289 + H281DRAFT_02144 0.46 +0.8 286,289 + H281DRAFT_02144 0.46 -0.2 286,380 + H281DRAFT_02144 0.53 -0.8 286,380 + H281DRAFT_02144 0.53 -0.3 286,380 + H281DRAFT_02144 0.53 +0.4 286,381 - H281DRAFT_02144 0.53 -0.0 286,381 - H281DRAFT_02144 0.53 -1.5 286,684 + H281DRAFT_02144 0.74 +0.0 286,909 + -0.2 286,909 + -0.0 286,909 + -1.6 286,909 + -0.6 286,961 + -0.4 286,961 + +1.4 286,961 + -0.9 286,962 - +0.3 287,049 + -1.5 287,050 - +0.2 287,050 - +1.5 287,107 + +0.8 287,141 + +0.4 287,163 + -0.2 287,264 - +0.9 287,304 + +0.4 287,320 - +0.4 287,393 - H281DRAFT_02145 0.56 -1.6 287,559 + -0.5 287,559 + +0.5 287,559 + -0.1 287,560 - -0.3 287,560 - -0.2 287,560 - -0.2 287,560 - -0.2 287,560 - +0.5 287,583 + -0.2 287,653 + +0.7 287,653 + +0.3 287,654 - +0.5 287,654 - -0.3 287,654 - -0.1 287,654 - +0.1 287,654 - -1.6 287,654 - -2.0 287,654 - -0.3 287,654 - +0.5 287,662 - -0.6 287,662 - +0.3 287,662 - -0.6 287,739 + +0.7 287,740 - -0.7 287,775 + +1.0 287,850 - +0.1 287,850 - -0.5 287,906 + +1.0 287,906 + +0.0 287,906 + -1.8 287,907 - +0.0 287,907 - +0.1 287,907 - +0.9 287,913 + H281DRAFT_02146 0.10 +1.1 287,914 - H281DRAFT_02146 0.10 -0.6
Or see this region's nucleotide sequence