Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01734 and H281DRAFT_01735 overlap by 20 nucleotides H281DRAFT_01735 and H281DRAFT_01736 overlap by 1 nucleotides H281DRAFT_01736 and H281DRAFT_01737 are separated by 144 nucleotides
H281DRAFT_01734: H281DRAFT_01734 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 625,127 to 626,623
_01734
H281DRAFT_01735: H281DRAFT_01735 - two-component system, OmpR family, heavy metal sensor histidine kinase CusS, at 626,604 to 628,028
_01735
H281DRAFT_01736: H281DRAFT_01736 - two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR, at 628,028 to 628,723
_01736
H281DRAFT_01737: H281DRAFT_01737 - circadian clock protein KaiC, at 628,868 to 630,349
_01737
Position (kb) 626
627
628
629 Strain fitness (log2 ratio) -2
-1
0
1
2 at 625.607 kb on + strand, within H281DRAFT_01734 at 625.698 kb on + strand, within H281DRAFT_01734 at 625.748 kb on + strand, within H281DRAFT_01734 at 625.869 kb on + strand, within H281DRAFT_01734 at 625.869 kb on + strand, within H281DRAFT_01734 at 626.078 kb on + strand, within H281DRAFT_01734 at 626.079 kb on - strand, within H281DRAFT_01734 at 626.841 kb on - strand, within H281DRAFT_01735 at 626.925 kb on - strand, within H281DRAFT_01735 at 627.176 kb on - strand, within H281DRAFT_01735 at 627.272 kb on - strand, within H281DRAFT_01735 at 627.549 kb on - strand, within H281DRAFT_01735 at 627.849 kb on - strand, within H281DRAFT_01735 at 627.966 kb on + strand at 628.005 kb on - strand at 628.052 kb on + strand at 628.052 kb on + strand at 628.053 kb on - strand at 628.180 kb on - strand, within H281DRAFT_01736 at 628.496 kb on - strand, within H281DRAFT_01736 at 628.572 kb on + strand, within H281DRAFT_01736 at 628.573 kb on - strand, within H281DRAFT_01736 at 628.662 kb on + strand at 628.744 kb on - strand at 628.967 kb on + strand at 628.968 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 625,607 + H281DRAFT_01734 0.32 +0.1 625,698 + H281DRAFT_01734 0.38 +0.4 625,748 + H281DRAFT_01734 0.41 -0.0 625,869 + H281DRAFT_01734 0.50 -0.2 625,869 + H281DRAFT_01734 0.50 +1.6 626,078 + H281DRAFT_01734 0.64 +0.2 626,079 - H281DRAFT_01734 0.64 +0.8 626,841 - H281DRAFT_01735 0.17 -0.8 626,925 - H281DRAFT_01735 0.23 -0.7 627,176 - H281DRAFT_01735 0.40 -0.2 627,272 - H281DRAFT_01735 0.47 -2.4 627,549 - H281DRAFT_01735 0.66 -0.4 627,849 - H281DRAFT_01735 0.87 +0.6 627,966 + -0.9 628,005 - -0.3 628,052 + +1.8 628,052 + -0.5 628,053 - +0.1 628,180 - H281DRAFT_01736 0.22 +0.3 628,496 - H281DRAFT_01736 0.67 +0.6 628,572 + H281DRAFT_01736 0.78 +1.0 628,573 - H281DRAFT_01736 0.78 -0.1 628,662 + +0.6 628,744 - +0.6 628,967 + +0.1 628,968 - +0.2
Or see this region's nucleotide sequence