Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01007

Experiment: 2'-Deoxyinosine 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01006 and H281DRAFT_01007 are separated by 892 nucleotidesH281DRAFT_01007 and H281DRAFT_01008 are separated by 502 nucleotides H281DRAFT_01006: H281DRAFT_01006 - Fatty acid hydroxylase superfamily protein, at 1,132,379 to 1,133,080 _01006 H281DRAFT_01007: H281DRAFT_01007 - hypothetical protein, at 1,133,973 to 1,134,182 _01007 H281DRAFT_01008: H281DRAFT_01008 - Two-component sensor histidine kinase, contains HisKA and HATPase domains, at 1,134,685 to 1,135,845 _01008 Position (kb) 1133 1134 1135Strain fitness (log2 ratio) -1 0 1at 1133.272 kb on + strandat 1134.158 kb on - strand, within H281DRAFT_01007at 1134.158 kb on - strand, within H281DRAFT_01007at 1134.191 kb on + strandat 1134.191 kb on + strandat 1134.377 kb on - strandat 1134.712 kb on + strandat 1134.712 kb on + strandat 1134.725 kb on + strandat 1135.111 kb on + strand, within H281DRAFT_01008at 1135.112 kb on - strand, within H281DRAFT_01008at 1135.112 kb on - strand, within H281DRAFT_01008

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C)
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1,133,272 + +0.5
1,134,158 - H281DRAFT_01007 0.88 +0.5
1,134,158 - H281DRAFT_01007 0.88 +1.0
1,134,191 + -0.4
1,134,191 + +0.3
1,134,377 - -1.2
1,134,712 + -0.4
1,134,712 + -0.2
1,134,725 + -0.2
1,135,111 + H281DRAFT_01008 0.37 +0.2
1,135,112 - H281DRAFT_01008 0.37 -0.6
1,135,112 - H281DRAFT_01008 0.37 -0.6

Or see this region's nucleotide sequence