Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00492 and H281DRAFT_00493 are separated by 124 nucleotides H281DRAFT_00493 and H281DRAFT_00494 are separated by 321 nucleotides
H281DRAFT_00492: H281DRAFT_00492 - TatD DNase family protein, at 551,481 to 552,269
_00492
H281DRAFT_00493: H281DRAFT_00493 - competence protein ComEC, at 552,394 to 555,198
_00493
H281DRAFT_00494: H281DRAFT_00494 - Pimeloyl-ACP methyl ester carboxylesterase, at 555,520 to 556,239
_00494
Position (kb) 552
553
554
555
556 Strain fitness (log2 ratio) -2
-1
0
1
2 at 551.447 kb on - strand at 551.447 kb on - strand at 551.781 kb on + strand, within H281DRAFT_00492 at 551.781 kb on + strand, within H281DRAFT_00492 at 551.782 kb on - strand, within H281DRAFT_00492 at 551.824 kb on - strand, within H281DRAFT_00492 at 551.836 kb on + strand, within H281DRAFT_00492 at 551.837 kb on - strand, within H281DRAFT_00492 at 551.899 kb on + strand, within H281DRAFT_00492 at 551.979 kb on + strand, within H281DRAFT_00492 at 551.980 kb on - strand, within H281DRAFT_00492 at 551.980 kb on - strand, within H281DRAFT_00492 at 551.980 kb on - strand, within H281DRAFT_00492 at 551.982 kb on - strand, within H281DRAFT_00492 at 551.993 kb on + strand, within H281DRAFT_00492 at 552.124 kb on - strand, within H281DRAFT_00492 at 552.124 kb on - strand, within H281DRAFT_00492 at 552.124 kb on - strand, within H281DRAFT_00492 at 552.211 kb on + strand at 552.267 kb on + strand at 552.267 kb on + strand at 552.267 kb on + strand at 552.399 kb on + strand at 552.399 kb on + strand at 552.399 kb on + strand at 552.399 kb on + strand at 552.399 kb on + strand at 552.399 kb on + strand at 552.400 kb on - strand at 552.400 kb on - strand at 552.400 kb on - strand at 552.400 kb on - strand at 552.400 kb on - strand at 552.762 kb on + strand, within H281DRAFT_00493 at 552.763 kb on - strand, within H281DRAFT_00493 at 553.016 kb on - strand, within H281DRAFT_00493 at 553.484 kb on + strand, within H281DRAFT_00493 at 553.484 kb on + strand, within H281DRAFT_00493 at 553.485 kb on - strand, within H281DRAFT_00493 at 553.485 kb on - strand, within H281DRAFT_00493 at 553.814 kb on - strand, within H281DRAFT_00493 at 553.936 kb on + strand, within H281DRAFT_00493 at 554.136 kb on - strand, within H281DRAFT_00493 at 554.136 kb on - strand, within H281DRAFT_00493 at 554.169 kb on + strand, within H281DRAFT_00493 at 554.303 kb on - strand, within H281DRAFT_00493 at 554.555 kb on + strand at 554.745 kb on + strand at 554.745 kb on + strand, within H281DRAFT_00493 at 554.746 kb on - strand, within H281DRAFT_00493 at 554.955 kb on + strand at 554.955 kb on + strand at 554.956 kb on - strand at 554.956 kb on - strand at 554.984 kb on + strand at 554.985 kb on - strand at 554.990 kb on - strand at 555.034 kb on + strand at 555.048 kb on + strand at 555.519 kb on + strand at 555.626 kb on - strand, within H281DRAFT_00494 at 555.668 kb on - strand, within H281DRAFT_00494 at 555.668 kb on - strand, within H281DRAFT_00494 at 555.919 kb on + strand, within H281DRAFT_00494 at 555.920 kb on - strand, within H281DRAFT_00494 at 555.920 kb on - strand, within H281DRAFT_00494 at 556.001 kb on - strand, within H281DRAFT_00494 at 556.001 kb on - strand, within H281DRAFT_00494 at 556.017 kb on + strand, within H281DRAFT_00494 at 556.018 kb on - strand, within H281DRAFT_00494
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 551,447 - -0.5 551,447 - +2.1 551,781 + H281DRAFT_00492 0.38 -0.3 551,781 + H281DRAFT_00492 0.38 +0.8 551,782 - H281DRAFT_00492 0.38 +0.8 551,824 - H281DRAFT_00492 0.43 -0.5 551,836 + H281DRAFT_00492 0.45 -0.6 551,837 - H281DRAFT_00492 0.45 +0.7 551,899 + H281DRAFT_00492 0.53 -1.6 551,979 + H281DRAFT_00492 0.63 -0.5 551,980 - H281DRAFT_00492 0.63 -0.3 551,980 - H281DRAFT_00492 0.63 +0.5 551,980 - H281DRAFT_00492 0.63 -0.3 551,982 - H281DRAFT_00492 0.63 +1.2 551,993 + H281DRAFT_00492 0.65 +0.9 552,124 - H281DRAFT_00492 0.81 -0.4 552,124 - H281DRAFT_00492 0.81 -1.9 552,124 - H281DRAFT_00492 0.81 +0.1 552,211 + +1.4 552,267 + +0.5 552,267 + -0.6 552,267 + +1.1 552,399 + -0.8 552,399 + +0.3 552,399 + +1.5 552,399 + +0.6 552,399 + +0.6 552,399 + +0.9 552,400 - +0.1 552,400 - +0.9 552,400 - -0.8 552,400 - -0.1 552,400 - +0.2 552,762 + H281DRAFT_00493 0.13 -0.6 552,763 - H281DRAFT_00493 0.13 -0.3 553,016 - H281DRAFT_00493 0.22 -0.3 553,484 + H281DRAFT_00493 0.39 -0.3 553,484 + H281DRAFT_00493 0.39 +1.0 553,485 - H281DRAFT_00493 0.39 -1.9 553,485 - H281DRAFT_00493 0.39 -0.1 553,814 - H281DRAFT_00493 0.51 -1.7 553,936 + H281DRAFT_00493 0.55 -0.2 554,136 - H281DRAFT_00493 0.62 -0.4 554,136 - H281DRAFT_00493 0.62 -0.1 554,169 + H281DRAFT_00493 0.63 -0.4 554,303 - H281DRAFT_00493 0.68 -0.3 554,555 + +2.5 554,745 + +0.3 554,745 + H281DRAFT_00493 0.84 -0.6 554,746 - H281DRAFT_00493 0.84 +0.0 554,955 + +0.2 554,955 + -2.5 554,956 - -0.2 554,956 - +0.8 554,984 + -0.8 554,985 - -0.9 554,990 - +0.2 555,034 + -1.0 555,048 + +0.3 555,519 + +0.1 555,626 - H281DRAFT_00494 0.15 -1.0 555,668 - H281DRAFT_00494 0.21 -0.1 555,668 - H281DRAFT_00494 0.21 -1.0 555,919 + H281DRAFT_00494 0.55 -0.9 555,920 - H281DRAFT_00494 0.56 +0.0 555,920 - H281DRAFT_00494 0.56 +0.3 556,001 - H281DRAFT_00494 0.67 -0.2 556,001 - H281DRAFT_00494 0.67 +1.1 556,017 + H281DRAFT_00494 0.69 +0.7 556,018 - H281DRAFT_00494 0.69 +0.5
Or see this region's nucleotide sequence