Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00445 and H281DRAFT_00446 are separated by 269 nucleotides H281DRAFT_00446 and H281DRAFT_00447 are separated by 574 nucleotides
H281DRAFT_00445: H281DRAFT_00445 - ATP-dependent helicase HrpA, at 488,943 to 493,397
_00445
H281DRAFT_00446: H281DRAFT_00446 - Autotransporter adhesin, at 493,667 to 496,537
_00446
H281DRAFT_00447: H281DRAFT_00447 - 40-residue YVTN family beta-propeller repeat-containing protein, at 497,112 to 498,131
_00447
Position (kb) 493
494
495
496
497 Strain fitness (log2 ratio) -2
-1
0
1 at 492.760 kb on - strand, within H281DRAFT_00445 at 493.003 kb on + strand at 493.230 kb on + strand at 493.230 kb on + strand at 493.230 kb on + strand at 493.231 kb on - strand at 493.231 kb on - strand at 493.369 kb on - strand at 493.369 kb on - strand at 493.369 kb on - strand at 493.412 kb on + strand at 493.669 kb on - strand at 493.679 kb on - strand at 493.738 kb on - strand at 493.868 kb on + strand at 493.868 kb on + strand at 493.929 kb on + strand at 493.929 kb on + strand at 493.930 kb on - strand at 494.269 kb on + strand, within H281DRAFT_00446 at 494.475 kb on + strand, within H281DRAFT_00446 at 494.812 kb on + strand, within H281DRAFT_00446 at 495.008 kb on + strand, within H281DRAFT_00446 at 495.008 kb on + strand, within H281DRAFT_00446 at 495.253 kb on - strand, within H281DRAFT_00446 at 495.286 kb on + strand, within H281DRAFT_00446 at 495.287 kb on - strand, within H281DRAFT_00446 at 495.459 kb on + strand, within H281DRAFT_00446 at 495.459 kb on + strand, within H281DRAFT_00446 at 495.575 kb on + strand, within H281DRAFT_00446 at 495.630 kb on - strand, within H281DRAFT_00446 at 495.630 kb on - strand, within H281DRAFT_00446 at 495.633 kb on + strand, within H281DRAFT_00446 at 495.633 kb on + strand, within H281DRAFT_00446 at 495.633 kb on + strand, within H281DRAFT_00446 at 495.633 kb on + strand, within H281DRAFT_00446 at 495.634 kb on - strand, within H281DRAFT_00446 at 495.634 kb on - strand, within H281DRAFT_00446 at 495.791 kb on - strand, within H281DRAFT_00446 at 495.791 kb on - strand, within H281DRAFT_00446 at 495.817 kb on + strand, within H281DRAFT_00446 at 496.322 kb on - strand at 496.668 kb on + strand at 496.861 kb on + strand at 496.862 kb on - strand at 496.862 kb on - strand at 496.884 kb on - strand at 496.930 kb on + strand at 497.079 kb on + strand at 497.079 kb on + strand at 497.079 kb on + strand at 497.080 kb on - strand at 497.080 kb on - strand at 497.080 kb on - strand at 497.276 kb on - strand, within H281DRAFT_00447 at 497.288 kb on - strand, within H281DRAFT_00447 at 497.423 kb on - strand, within H281DRAFT_00447 at 497.471 kb on + strand, within H281DRAFT_00447 at 497.501 kb on + strand, within H281DRAFT_00447 at 497.505 kb on + strand, within H281DRAFT_00447 at 497.505 kb on + strand, within H281DRAFT_00447 at 497.505 kb on + strand, within H281DRAFT_00447 at 497.505 kb on + strand, within H281DRAFT_00447 at 497.505 kb on + strand, within H281DRAFT_00447 at 497.505 kb on + strand, within H281DRAFT_00447 at 497.506 kb on - strand, within H281DRAFT_00447 at 497.506 kb on - strand, within H281DRAFT_00447 at 497.506 kb on - strand, within H281DRAFT_00447 at 497.506 kb on - strand, within H281DRAFT_00447 at 497.506 kb on - strand, within H281DRAFT_00447 at 497.506 kb on - strand, within H281DRAFT_00447 at 497.511 kb on + strand, within H281DRAFT_00447 at 497.511 kb on + strand, within H281DRAFT_00447 at 497.512 kb on - strand, within H281DRAFT_00447 at 497.512 kb on - strand, within H281DRAFT_00447
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 492,760 - H281DRAFT_00445 0.86 -0.0 493,003 + -0.9 493,230 + -0.0 493,230 + -1.1 493,230 + -1.3 493,231 - -1.9 493,231 - -0.9 493,369 - +0.3 493,369 - +0.3 493,369 - +0.1 493,412 + +0.6 493,669 - -0.7 493,679 - -0.6 493,738 - -0.3 493,868 + +0.3 493,868 + -0.7 493,929 + -1.1 493,929 + +1.0 493,930 - -0.7 494,269 + H281DRAFT_00446 0.21 -0.9 494,475 + H281DRAFT_00446 0.28 -0.4 494,812 + H281DRAFT_00446 0.40 -0.4 495,008 + H281DRAFT_00446 0.47 -0.1 495,008 + H281DRAFT_00446 0.47 -0.5 495,253 - H281DRAFT_00446 0.55 -0.7 495,286 + H281DRAFT_00446 0.56 -0.4 495,287 - H281DRAFT_00446 0.56 +0.0 495,459 + H281DRAFT_00446 0.62 -0.2 495,459 + H281DRAFT_00446 0.62 +1.4 495,575 + H281DRAFT_00446 0.66 +0.3 495,630 - H281DRAFT_00446 0.68 -0.8 495,630 - H281DRAFT_00446 0.68 +0.5 495,633 + H281DRAFT_00446 0.68 -0.8 495,633 + H281DRAFT_00446 0.68 +0.6 495,633 + H281DRAFT_00446 0.68 -0.0 495,633 + H281DRAFT_00446 0.68 +0.4 495,634 - H281DRAFT_00446 0.69 -0.3 495,634 - H281DRAFT_00446 0.69 -0.4 495,791 - H281DRAFT_00446 0.74 +0.6 495,791 - H281DRAFT_00446 0.74 -0.3 495,817 + H281DRAFT_00446 0.75 -0.7 496,322 - -0.6 496,668 + -2.0 496,861 + -0.6 496,862 - -0.1 496,862 - -0.7 496,884 - -0.2 496,930 + -0.1 497,079 + -0.4 497,079 + -0.7 497,079 + +0.9 497,080 - +0.2 497,080 - +0.3 497,080 - +1.2 497,276 - H281DRAFT_00447 0.16 -0.3 497,288 - H281DRAFT_00447 0.17 +0.2 497,423 - H281DRAFT_00447 0.30 +0.3 497,471 + H281DRAFT_00447 0.35 -0.6 497,501 + H281DRAFT_00447 0.38 +0.2 497,505 + H281DRAFT_00447 0.39 +0.5 497,505 + H281DRAFT_00447 0.39 +0.5 497,505 + H281DRAFT_00447 0.39 -0.6 497,505 + H281DRAFT_00447 0.39 +0.7 497,505 + H281DRAFT_00447 0.39 -0.7 497,505 + H281DRAFT_00447 0.39 -0.6 497,506 - H281DRAFT_00447 0.39 +0.7 497,506 - H281DRAFT_00447 0.39 -0.3 497,506 - H281DRAFT_00447 0.39 +0.5 497,506 - H281DRAFT_00447 0.39 -0.2 497,506 - H281DRAFT_00447 0.39 +0.0 497,506 - H281DRAFT_00447 0.39 -0.3 497,511 + H281DRAFT_00447 0.39 -0.7 497,511 + H281DRAFT_00447 0.39 +0.3 497,512 - H281DRAFT_00447 0.39 +0.7 497,512 - H281DRAFT_00447 0.39 +0.4
Or see this region's nucleotide sequence