Experiment: L-Threonine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3805 and Ac3H11_3806 overlap by 41 nucleotides Ac3H11_3806 and Ac3H11_3807 overlap by 8 nucleotides Ac3H11_3807 and Ac3H11_3808 are separated by 65 nucleotides
Ac3H11_3805 - Iron-sulfur cluster-binding protein, at 17,458 to 19,527
_3805
Ac3H11_3806 - FIG00433900: hypothetical protein, at 19,487 to 20,203
_3806
Ac3H11_3807 - FIG00431662: hypothetical protein, at 20,196 to 20,756
_3807
Ac3H11_3808 - tungsten-containing formate dehydrogenase alpha subunit, at 20,822 to 23,707
_3808
Position (kb) 20
21 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 19.208 kb on + strand, within Ac3H11_3805 at 19.208 kb on + strand, within Ac3H11_3805 at 19.209 kb on - strand, within Ac3H11_3805 at 19.209 kb on - strand, within Ac3H11_3805 at 19.209 kb on - strand, within Ac3H11_3805 at 19.642 kb on + strand, within Ac3H11_3806 at 19.643 kb on - strand, within Ac3H11_3806 at 19.643 kb on - strand, within Ac3H11_3806 at 19.658 kb on + strand, within Ac3H11_3806 at 19.731 kb on - strand, within Ac3H11_3806 at 19.872 kb on + strand, within Ac3H11_3806 at 19.873 kb on - strand, within Ac3H11_3806 at 19.873 kb on - strand, within Ac3H11_3806 at 19.873 kb on - strand, within Ac3H11_3806 at 19.884 kb on + strand, within Ac3H11_3806 at 19.884 kb on + strand, within Ac3H11_3806 at 19.884 kb on + strand, within Ac3H11_3806 at 19.884 kb on + strand, within Ac3H11_3806 at 19.884 kb on + strand, within Ac3H11_3806 at 19.884 kb on + strand, within Ac3H11_3806 at 19.884 kb on + strand, within Ac3H11_3806 at 19.884 kb on + strand, within Ac3H11_3806 at 19.885 kb on - strand, within Ac3H11_3806 at 19.885 kb on - strand, within Ac3H11_3806 at 19.885 kb on - strand, within Ac3H11_3806 at 19.885 kb on - strand, within Ac3H11_3806 at 19.885 kb on - strand, within Ac3H11_3806 at 20.326 kb on + strand, within Ac3H11_3807 at 20.327 kb on - strand, within Ac3H11_3807 at 20.428 kb on + strand, within Ac3H11_3807 at 20.428 kb on + strand, within Ac3H11_3807 at 20.428 kb on + strand, within Ac3H11_3807 at 20.429 kb on - strand, within Ac3H11_3807 at 20.429 kb on - strand, within Ac3H11_3807 at 20.429 kb on - strand, within Ac3H11_3807 at 20.481 kb on - strand, within Ac3H11_3807 at 20.481 kb on - strand, within Ac3H11_3807 at 20.542 kb on + strand, within Ac3H11_3807 at 20.543 kb on - strand, within Ac3H11_3807 at 20.769 kb on + strand at 20.770 kb on - strand at 20.865 kb on + strand at 20.865 kb on + strand at 20.865 kb on + strand at 20.938 kb on - strand at 21.312 kb on + strand, within Ac3H11_3808 at 21.313 kb on - strand, within Ac3H11_3808 at 21.313 kb on - strand, within Ac3H11_3808 at 21.313 kb on - strand, within Ac3H11_3808 at 21.313 kb on - strand, within Ac3H11_3808 at 21.313 kb on - strand, within Ac3H11_3808 at 21.393 kb on + strand, within Ac3H11_3808 at 21.393 kb on + strand, within Ac3H11_3808 at 21.426 kb on + strand, within Ac3H11_3808 at 21.426 kb on + strand, within Ac3H11_3808 at 21.426 kb on + strand, within Ac3H11_3808 at 21.426 kb on + strand, within Ac3H11_3808 at 21.426 kb on + strand, within Ac3H11_3808 at 21.427 kb on - strand, within Ac3H11_3808 at 21.714 kb on + strand, within Ac3H11_3808 at 21.714 kb on + strand, within Ac3H11_3808 at 21.714 kb on + strand, within Ac3H11_3808 at 21.714 kb on + strand, within Ac3H11_3808 at 21.714 kb on + strand, within Ac3H11_3808 at 21.714 kb on + strand, within Ac3H11_3808 at 21.714 kb on + strand, within Ac3H11_3808 at 21.714 kb on + strand, within Ac3H11_3808 at 21.714 kb on + strand, within Ac3H11_3808 at 21.715 kb on - strand, within Ac3H11_3808 at 21.715 kb on - strand, within Ac3H11_3808 at 21.715 kb on - strand, within Ac3H11_3808 at 21.715 kb on - strand, within Ac3H11_3808 at 21.715 kb on - strand, within Ac3H11_3808 at 21.715 kb on - strand, within Ac3H11_3808 at 21.715 kb on - strand, within Ac3H11_3808 at 21.715 kb on - strand, within Ac3H11_3808 at 21.715 kb on - strand, within Ac3H11_3808 at 21.715 kb on - strand, within Ac3H11_3808 at 21.715 kb on - strand, within Ac3H11_3808 at 21.715 kb on - strand, within Ac3H11_3808 at 21.715 kb on - strand, within Ac3H11_3808 at 21.715 kb on - strand, within Ac3H11_3808 at 21.715 kb on - strand, within Ac3H11_3808 at 21.715 kb on - strand, within Ac3H11_3808
Per-strain Table
Position Strand Gene LocusTag Fraction L-Threonine (N) remove 19,208 + Ac3H11_3805 0.85 -0.4 19,208 + Ac3H11_3805 0.85 -0.5 19,209 - Ac3H11_3805 0.85 +0.8 19,209 - Ac3H11_3805 0.85 +0.3 19,209 - Ac3H11_3805 0.85 +0.6 19,642 + Ac3H11_3806 0.22 -1.6 19,643 - Ac3H11_3806 0.22 +1.8 19,643 - Ac3H11_3806 0.22 -1.7 19,658 + Ac3H11_3806 0.24 -0.7 19,731 - Ac3H11_3806 0.34 -1.1 19,872 + Ac3H11_3806 0.54 -0.5 19,873 - Ac3H11_3806 0.54 +0.4 19,873 - Ac3H11_3806 0.54 -0.7 19,873 - Ac3H11_3806 0.54 +1.0 19,884 + Ac3H11_3806 0.55 +0.4 19,884 + Ac3H11_3806 0.55 +0.5 19,884 + Ac3H11_3806 0.55 +1.0 19,884 + Ac3H11_3806 0.55 -2.6 19,884 + Ac3H11_3806 0.55 +1.8 19,884 + Ac3H11_3806 0.55 +2.1 19,884 + Ac3H11_3806 0.55 -2.6 19,884 + Ac3H11_3806 0.55 -0.1 19,885 - Ac3H11_3806 0.56 +0.4 19,885 - Ac3H11_3806 0.56 +0.2 19,885 - Ac3H11_3806 0.56 -0.0 19,885 - Ac3H11_3806 0.56 +0.8 19,885 - Ac3H11_3806 0.56 +1.8 20,326 + Ac3H11_3807 0.23 +0.9 20,327 - Ac3H11_3807 0.23 +0.3 20,428 + Ac3H11_3807 0.41 +1.2 20,428 + Ac3H11_3807 0.41 +0.5 20,428 + Ac3H11_3807 0.41 -2.1 20,429 - Ac3H11_3807 0.42 +0.4 20,429 - Ac3H11_3807 0.42 +0.1 20,429 - Ac3H11_3807 0.42 +0.5 20,481 - Ac3H11_3807 0.51 +0.4 20,481 - Ac3H11_3807 0.51 +0.9 20,542 + Ac3H11_3807 0.62 -0.1 20,543 - Ac3H11_3807 0.62 -0.8 20,769 + +0.5 20,770 - +0.5 20,865 + +1.1 20,865 + -1.1 20,865 + -0.3 20,938 - +0.5 21,312 + Ac3H11_3808 0.17 -0.7 21,313 - Ac3H11_3808 0.17 +0.8 21,313 - Ac3H11_3808 0.17 -0.7 21,313 - Ac3H11_3808 0.17 -0.8 21,313 - Ac3H11_3808 0.17 -0.2 21,313 - Ac3H11_3808 0.17 +0.0 21,393 + Ac3H11_3808 0.20 +5.1 21,393 + Ac3H11_3808 0.20 +1.8 21,426 + Ac3H11_3808 0.21 +1.1 21,426 + Ac3H11_3808 0.21 +1.0 21,426 + Ac3H11_3808 0.21 +0.2 21,426 + Ac3H11_3808 0.21 +1.4 21,426 + Ac3H11_3808 0.21 -0.1 21,427 - Ac3H11_3808 0.21 +0.2 21,714 + Ac3H11_3808 0.31 -0.6 21,714 + Ac3H11_3808 0.31 +0.9 21,714 + Ac3H11_3808 0.31 +0.4 21,714 + Ac3H11_3808 0.31 -0.4 21,714 + Ac3H11_3808 0.31 +0.2 21,714 + Ac3H11_3808 0.31 -0.3 21,714 + Ac3H11_3808 0.31 +0.0 21,714 + Ac3H11_3808 0.31 +0.4 21,714 + Ac3H11_3808 0.31 -0.1 21,715 - Ac3H11_3808 0.31 -0.3 21,715 - Ac3H11_3808 0.31 +0.1 21,715 - Ac3H11_3808 0.31 +0.9 21,715 - Ac3H11_3808 0.31 +0.8 21,715 - Ac3H11_3808 0.31 +0.3 21,715 - Ac3H11_3808 0.31 -1.9 21,715 - Ac3H11_3808 0.31 -0.5 21,715 - Ac3H11_3808 0.31 -1.4 21,715 - Ac3H11_3808 0.31 -1.2 21,715 - Ac3H11_3808 0.31 -0.1 21,715 - Ac3H11_3808 0.31 +1.2 21,715 - Ac3H11_3808 0.31 +0.0 21,715 - Ac3H11_3808 0.31 +0.4 21,715 - Ac3H11_3808 0.31 +1.2 21,715 - Ac3H11_3808 0.31 -0.8 21,715 - Ac3H11_3808 0.31 +0.5
Or see this region's nucleotide sequence