Experiment: L-Threonine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3081 and Ac3H11_3082 overlap by 4 nucleotides Ac3H11_3082 and Ac3H11_3083 are separated by 274 nucleotides
Ac3H11_3081 - Methyl-accepting chemotaxis protein, at 103,863 to 106,556
_3081
Ac3H11_3082 - conserved hypothetical protein, at 106,553 to 107,341
_3082
Ac3H11_3083 - Benzoyl-CoA oxygenase component A, at 107,616 to 108,884
_3083
Position (kb)
106
107
108 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 105.675 kb on + strand, within Ac3H11_3081 at 105.676 kb on - strand, within Ac3H11_3081 at 106.229 kb on - strand, within Ac3H11_3081 at 106.229 kb on - strand, within Ac3H11_3081 at 106.432 kb on + strand at 106.432 kb on + strand at 106.432 kb on + strand at 106.432 kb on + strand at 106.433 kb on - strand at 107.195 kb on + strand, within Ac3H11_3082 at 107.337 kb on + strand at 107.337 kb on + strand at 107.338 kb on - strand at 107.338 kb on - strand at 107.338 kb on - strand at 107.338 kb on - strand at 107.338 kb on - strand at 107.436 kb on - strand at 107.491 kb on + strand at 107.491 kb on + strand at 107.491 kb on + strand at 107.491 kb on + strand at 107.491 kb on + strand at 107.491 kb on + strand at 107.492 kb on - strand at 107.492 kb on - strand at 107.492 kb on - strand at 107.492 kb on - strand at 107.492 kb on - strand at 107.492 kb on - strand at 107.492 kb on - strand at 107.564 kb on + strand at 107.565 kb on - strand at 107.565 kb on - strand at 107.565 kb on - strand at 107.620 kb on + strand at 107.621 kb on - strand at 107.752 kb on + strand, within Ac3H11_3083 at 107.752 kb on + strand, within Ac3H11_3083 at 107.752 kb on + strand, within Ac3H11_3083 at 107.752 kb on + strand, within Ac3H11_3083 at 107.752 kb on + strand, within Ac3H11_3083 at 107.752 kb on + strand, within Ac3H11_3083 at 107.752 kb on + strand, within Ac3H11_3083 at 107.752 kb on + strand, within Ac3H11_3083 at 107.752 kb on + strand, within Ac3H11_3083 at 107.752 kb on + strand, within Ac3H11_3083 at 107.752 kb on + strand, within Ac3H11_3083 at 107.752 kb on + strand, within Ac3H11_3083 at 107.752 kb on + strand, within Ac3H11_3083 at 107.752 kb on + strand, within Ac3H11_3083 at 107.753 kb on - strand, within Ac3H11_3083 at 107.753 kb on - strand, within Ac3H11_3083 at 107.753 kb on - strand, within Ac3H11_3083 at 107.753 kb on - strand, within Ac3H11_3083 at 107.753 kb on - strand, within Ac3H11_3083 at 107.824 kb on + strand, within Ac3H11_3083 at 107.824 kb on + strand, within Ac3H11_3083 at 107.824 kb on + strand, within Ac3H11_3083 at 107.825 kb on - strand, within Ac3H11_3083 at 107.825 kb on - strand, within Ac3H11_3083 at 107.825 kb on - strand, within Ac3H11_3083 at 107.908 kb on + strand, within Ac3H11_3083 at 107.909 kb on - strand, within Ac3H11_3083 at 108.215 kb on + strand, within Ac3H11_3083 at 108.215 kb on + strand, within Ac3H11_3083 at 108.215 kb on + strand, within Ac3H11_3083 at 108.216 kb on - strand, within Ac3H11_3083 at 108.216 kb on - strand, within Ac3H11_3083 at 108.216 kb on - strand, within Ac3H11_3083 at 108.216 kb on - strand, within Ac3H11_3083 at 108.216 kb on - strand, within Ac3H11_3083 at 108.216 kb on - strand, within Ac3H11_3083 at 108.216 kb on - strand, within Ac3H11_3083 at 108.216 kb on - strand, within Ac3H11_3083 at 108.216 kb on - strand, within Ac3H11_3083 at 108.216 kb on - strand, within Ac3H11_3083 at 108.217 kb on + strand, within Ac3H11_3083 at 108.257 kb on - strand, within Ac3H11_3083
Per-strain Table
Position Strand Gene LocusTag Fraction L-Threonine (N) remove 105,675 + Ac3H11_3081 0.67 +6.7 105,676 - Ac3H11_3081 0.67 +1.6 106,229 - Ac3H11_3081 0.88 -1.1 106,229 - Ac3H11_3081 0.88 +1.6 106,432 + +0.4 106,432 + -0.2 106,432 + +0.3 106,432 + +1.9 106,433 - -0.3 107,195 + Ac3H11_3082 0.81 +1.7 107,337 + +1.5 107,337 + -1.2 107,338 - +0.1 107,338 - +1.0 107,338 - +0.8 107,338 - -0.5 107,338 - +0.3 107,436 - -0.2 107,491 + -0.6 107,491 + -0.2 107,491 + -1.0 107,491 + +0.2 107,491 + +0.0 107,491 + +0.0 107,492 - -0.5 107,492 - -1.1 107,492 - +1.1 107,492 - -0.2 107,492 - +0.3 107,492 - -0.3 107,492 - -0.6 107,564 + -0.1 107,565 - +1.4 107,565 - +1.2 107,565 - +2.5 107,620 + -0.9 107,621 - -1.4 107,752 + Ac3H11_3083 0.11 +0.1 107,752 + Ac3H11_3083 0.11 +0.0 107,752 + Ac3H11_3083 0.11 -0.7 107,752 + Ac3H11_3083 0.11 -0.9 107,752 + Ac3H11_3083 0.11 -0.3 107,752 + Ac3H11_3083 0.11 -2.7 107,752 + Ac3H11_3083 0.11 -0.9 107,752 + Ac3H11_3083 0.11 +0.0 107,752 + Ac3H11_3083 0.11 -0.3 107,752 + Ac3H11_3083 0.11 -1.0 107,752 + Ac3H11_3083 0.11 -1.1 107,752 + Ac3H11_3083 0.11 -1.9 107,752 + Ac3H11_3083 0.11 +0.0 107,752 + Ac3H11_3083 0.11 -1.5 107,753 - Ac3H11_3083 0.11 -1.6 107,753 - Ac3H11_3083 0.11 -0.1 107,753 - Ac3H11_3083 0.11 -1.0 107,753 - Ac3H11_3083 0.11 -2.0 107,753 - Ac3H11_3083 0.11 -1.8 107,824 + Ac3H11_3083 0.16 +0.2 107,824 + Ac3H11_3083 0.16 -1.2 107,824 + Ac3H11_3083 0.16 -0.8 107,825 - Ac3H11_3083 0.16 -1.6 107,825 - Ac3H11_3083 0.16 +0.4 107,825 - Ac3H11_3083 0.16 -0.8 107,908 + Ac3H11_3083 0.23 -0.7 107,909 - Ac3H11_3083 0.23 -2.0 108,215 + Ac3H11_3083 0.47 -2.0 108,215 + Ac3H11_3083 0.47 -0.3 108,215 + Ac3H11_3083 0.47 +0.1 108,216 - Ac3H11_3083 0.47 -0.3 108,216 - Ac3H11_3083 0.47 +0.5 108,216 - Ac3H11_3083 0.47 +0.5 108,216 - Ac3H11_3083 0.47 -0.5 108,216 - Ac3H11_3083 0.47 -0.6 108,216 - Ac3H11_3083 0.47 +0.2 108,216 - Ac3H11_3083 0.47 -2.8 108,216 - Ac3H11_3083 0.47 -0.7 108,216 - Ac3H11_3083 0.47 -2.7 108,216 - Ac3H11_3083 0.47 -1.4 108,217 + Ac3H11_3083 0.47 -0.7 108,257 - Ac3H11_3083 0.51 -1.3
Or see this region's nucleotide sequence