Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_1374

Experiment: L-Threonine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_1372 and Ac3H11_1373 are separated by 37 nucleotidesAc3H11_1373 and Ac3H11_1374 are separated by 60 nucleotidesAc3H11_1374 and Ac3H11_1375 are separated by 41 nucleotidesAc3H11_1375 and Ac3H11_1376 are separated by 19 nucleotides Ac3H11_1372 - Flagellar basal-body rod protein FlgG, at 62,720 to 63,502 _1372 Ac3H11_1373 - Flagellar basal-body rod protein FlgF, at 63,540 to 64,280 _1373 Ac3H11_1374 - Flagellar hook protein FlgE, at 64,341 to 65,621 _1374 Ac3H11_1375 - Flagellar basal-body rod modification protein FlgD, at 65,663 to 66,319 _1375 Ac3H11_1376 - Flagellar basal-body rod protein FlgC, at 66,339 to 66,743 _1376 Position (kb) 64 65 66Strain fitness (log2 ratio) -2 -1 0 1 2 3at 63.403 kb on - strand, within Ac3H11_1372at 63.469 kb on + strandat 63.469 kb on + strandat 63.469 kb on + strandat 63.470 kb on - strandat 63.470 kb on - strandat 63.470 kb on - strandat 63.470 kb on - strandat 63.985 kb on + strand, within Ac3H11_1373at 63.985 kb on + strand, within Ac3H11_1373at 63.985 kb on + strand, within Ac3H11_1373at 63.986 kb on - strand, within Ac3H11_1373at 63.986 kb on - strand, within Ac3H11_1373at 64.090 kb on + strand, within Ac3H11_1373at 64.265 kb on - strandat 64.265 kb on - strandat 64.265 kb on - strandat 64.265 kb on - strandat 64.265 kb on - strandat 64.265 kb on - strandat 64.265 kb on - strandat 64.642 kb on + strand, within Ac3H11_1374at 64.643 kb on - strand, within Ac3H11_1374at 64.702 kb on + strand, within Ac3H11_1374at 64.703 kb on - strand, within Ac3H11_1374at 64.703 kb on - strand, within Ac3H11_1374at 64.703 kb on - strand, within Ac3H11_1374at 64.780 kb on + strand, within Ac3H11_1374at 64.780 kb on + strand, within Ac3H11_1374at 64.780 kb on + strand, within Ac3H11_1374at 64.781 kb on - strand, within Ac3H11_1374at 64.781 kb on - strand, within Ac3H11_1374at 64.781 kb on - strand, within Ac3H11_1374at 64.781 kb on - strand, within Ac3H11_1374at 64.937 kb on + strand, within Ac3H11_1374at 64.958 kb on - strand, within Ac3H11_1374at 64.996 kb on + strand, within Ac3H11_1374at 64.996 kb on + strand, within Ac3H11_1374at 64.996 kb on + strand, within Ac3H11_1374at 64.996 kb on + strand, within Ac3H11_1374at 64.997 kb on - strand, within Ac3H11_1374at 64.997 kb on - strand, within Ac3H11_1374at 65.053 kb on + strand, within Ac3H11_1374at 65.053 kb on + strand, within Ac3H11_1374at 65.053 kb on + strand, within Ac3H11_1374at 65.053 kb on + strand, within Ac3H11_1374at 65.053 kb on + strand, within Ac3H11_1374at 65.053 kb on + strand, within Ac3H11_1374at 65.053 kb on + strand, within Ac3H11_1374at 65.053 kb on + strand, within Ac3H11_1374at 65.054 kb on - strand, within Ac3H11_1374at 65.054 kb on - strand, within Ac3H11_1374at 65.054 kb on - strand, within Ac3H11_1374at 65.054 kb on - strand, within Ac3H11_1374at 65.054 kb on - strand, within Ac3H11_1374at 65.054 kb on - strand, within Ac3H11_1374at 65.320 kb on + strand, within Ac3H11_1374at 65.532 kb on + strandat 65.532 kb on + strandat 65.688 kb on + strandat 65.688 kb on + strandat 65.689 kb on - strandat 65.689 kb on - strandat 65.689 kb on - strandat 65.689 kb on - strandat 65.689 kb on - strandat 65.844 kb on + strand, within Ac3H11_1375at 65.844 kb on + strand, within Ac3H11_1375at 65.844 kb on + strand, within Ac3H11_1375at 65.844 kb on + strand, within Ac3H11_1375at 65.844 kb on + strand, within Ac3H11_1375at 65.844 kb on + strand, within Ac3H11_1375at 65.844 kb on + strand, within Ac3H11_1375at 65.845 kb on - strand, within Ac3H11_1375at 65.845 kb on - strand, within Ac3H11_1375at 65.845 kb on - strand, within Ac3H11_1375at 65.845 kb on - strand, within Ac3H11_1375at 66.340 kb on + strandat 66.340 kb on + strandat 66.341 kb on - strandat 66.341 kb on - strandat 66.341 kb on - strandat 66.409 kb on + strand, within Ac3H11_1376at 66.475 kb on + strand, within Ac3H11_1376at 66.475 kb on + strand, within Ac3H11_1376at 66.475 kb on + strand, within Ac3H11_1376at 66.475 kb on + strand, within Ac3H11_1376at 66.475 kb on + strand, within Ac3H11_1376at 66.476 kb on - strand, within Ac3H11_1376at 66.476 kb on - strand, within Ac3H11_1376at 66.476 kb on - strand, within Ac3H11_1376at 66.476 kb on - strand, within Ac3H11_1376at 66.476 kb on - strand, within Ac3H11_1376at 66.476 kb on - strand, within Ac3H11_1376at 66.476 kb on - strand, within Ac3H11_1376at 66.476 kb on - strand, within Ac3H11_1376at 66.558 kb on + strand, within Ac3H11_1376at 66.558 kb on + strand, within Ac3H11_1376at 66.558 kb on + strand, within Ac3H11_1376at 66.559 kb on - strand, within Ac3H11_1376at 66.619 kb on + strand, within Ac3H11_1376at 66.619 kb on + strand, within Ac3H11_1376at 66.619 kb on + strand, within Ac3H11_1376at 66.619 kb on + strand, within Ac3H11_1376at 66.619 kb on + strand, within Ac3H11_1376at 66.619 kb on + strand, within Ac3H11_1376at 66.619 kb on + strand, within Ac3H11_1376at 66.619 kb on + strand, within Ac3H11_1376at 66.619 kb on + strand, within Ac3H11_1376at 66.619 kb on + strand, within Ac3H11_1376at 66.619 kb on + strand, within Ac3H11_1376at 66.619 kb on + strand, within Ac3H11_1376at 66.620 kb on - strand, within Ac3H11_1376at 66.620 kb on - strand, within Ac3H11_1376at 66.620 kb on - strand, within Ac3H11_1376at 66.620 kb on - strand, within Ac3H11_1376at 66.620 kb on - strand, within Ac3H11_1376at 66.620 kb on - strand, within Ac3H11_1376at 66.620 kb on - strand, within Ac3H11_1376

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Threonine (N)
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63,403 - Ac3H11_1372 0.87 -0.7
63,469 + +1.8
63,469 + -1.6
63,469 + -0.7
63,470 - +0.6
63,470 - +1.2
63,470 - -1.5
63,470 - +1.1
63,985 + Ac3H11_1373 0.60 +0.3
63,985 + Ac3H11_1373 0.60 +0.7
63,985 + Ac3H11_1373 0.60 +1.4
63,986 - Ac3H11_1373 0.60 -0.2
63,986 - Ac3H11_1373 0.60 +0.1
64,090 + Ac3H11_1373 0.74 -0.1
64,265 - -0.9
64,265 - +0.3
64,265 - -0.0
64,265 - +0.4
64,265 - -0.3
64,265 - +0.1
64,265 - +1.1
64,642 + Ac3H11_1374 0.23 +1.0
64,643 - Ac3H11_1374 0.24 +0.2
64,702 + Ac3H11_1374 0.28 +0.0
64,703 - Ac3H11_1374 0.28 -1.0
64,703 - Ac3H11_1374 0.28 -0.5
64,703 - Ac3H11_1374 0.28 +0.8
64,780 + Ac3H11_1374 0.34 +0.6
64,780 + Ac3H11_1374 0.34 -0.3
64,780 + Ac3H11_1374 0.34 -0.6
64,781 - Ac3H11_1374 0.34 -0.3
64,781 - Ac3H11_1374 0.34 -0.8
64,781 - Ac3H11_1374 0.34 -1.0
64,781 - Ac3H11_1374 0.34 -1.8
64,937 + Ac3H11_1374 0.47 +0.3
64,958 - Ac3H11_1374 0.48 -0.3
64,996 + Ac3H11_1374 0.51 -0.0
64,996 + Ac3H11_1374 0.51 -0.5
64,996 + Ac3H11_1374 0.51 +0.5
64,996 + Ac3H11_1374 0.51 +0.7
64,997 - Ac3H11_1374 0.51 -0.0
64,997 - Ac3H11_1374 0.51 -0.6
65,053 + Ac3H11_1374 0.56 +1.3
65,053 + Ac3H11_1374 0.56 -0.7
65,053 + Ac3H11_1374 0.56 -0.1
65,053 + Ac3H11_1374 0.56 -1.7
65,053 + Ac3H11_1374 0.56 +1.4
65,053 + Ac3H11_1374 0.56 +0.3
65,053 + Ac3H11_1374 0.56 +1.6
65,053 + Ac3H11_1374 0.56 -0.4
65,054 - Ac3H11_1374 0.56 -0.1
65,054 - Ac3H11_1374 0.56 -0.0
65,054 - Ac3H11_1374 0.56 +0.3
65,054 - Ac3H11_1374 0.56 -1.2
65,054 - Ac3H11_1374 0.56 -1.9
65,054 - Ac3H11_1374 0.56 -1.6
65,320 + Ac3H11_1374 0.76 +0.4
65,532 + +0.8
65,532 + -0.2
65,688 + -0.7
65,688 + +0.2
65,689 - -0.2
65,689 - -0.3
65,689 - -0.0
65,689 - -0.5
65,689 - +0.1
65,844 + Ac3H11_1375 0.28 -0.2
65,844 + Ac3H11_1375 0.28 -0.2
65,844 + Ac3H11_1375 0.28 +0.3
65,844 + Ac3H11_1375 0.28 +1.1
65,844 + Ac3H11_1375 0.28 -0.3
65,844 + Ac3H11_1375 0.28 +0.5
65,844 + Ac3H11_1375 0.28 +0.1
65,845 - Ac3H11_1375 0.28 +2.0
65,845 - Ac3H11_1375 0.28 +0.4
65,845 - Ac3H11_1375 0.28 -1.7
65,845 - Ac3H11_1375 0.28 +0.3
66,340 + -0.5
66,340 + +0.1
66,341 - +1.4
66,341 - -0.3
66,341 - +0.2
66,409 + Ac3H11_1376 0.17 +2.8
66,475 + Ac3H11_1376 0.34 -0.4
66,475 + Ac3H11_1376 0.34 +1.8
66,475 + Ac3H11_1376 0.34 -0.1
66,475 + Ac3H11_1376 0.34 +1.0
66,475 + Ac3H11_1376 0.34 +0.3
66,476 - Ac3H11_1376 0.34 +0.3
66,476 - Ac3H11_1376 0.34 +0.2
66,476 - Ac3H11_1376 0.34 +3.4
66,476 - Ac3H11_1376 0.34 -1.6
66,476 - Ac3H11_1376 0.34 +1.3
66,476 - Ac3H11_1376 0.34 +2.4
66,476 - Ac3H11_1376 0.34 -0.4
66,476 - Ac3H11_1376 0.34 -0.6
66,558 + Ac3H11_1376 0.54 -0.2
66,558 + Ac3H11_1376 0.54 -0.3
66,558 + Ac3H11_1376 0.54 -0.4
66,559 - Ac3H11_1376 0.54 +0.5
66,619 + Ac3H11_1376 0.69 -0.4
66,619 + Ac3H11_1376 0.69 +0.5
66,619 + Ac3H11_1376 0.69 -0.0
66,619 + Ac3H11_1376 0.69 +1.3
66,619 + Ac3H11_1376 0.69 -1.4
66,619 + Ac3H11_1376 0.69 -0.2
66,619 + Ac3H11_1376 0.69 -0.2
66,619 + Ac3H11_1376 0.69 +0.8
66,619 + Ac3H11_1376 0.69 -0.5
66,619 + Ac3H11_1376 0.69 -0.3
66,619 + Ac3H11_1376 0.69 +0.6
66,619 + Ac3H11_1376 0.69 +1.9
66,620 - Ac3H11_1376 0.69 -0.6
66,620 - Ac3H11_1376 0.69 +1.2
66,620 - Ac3H11_1376 0.69 -0.1
66,620 - Ac3H11_1376 0.69 +0.8
66,620 - Ac3H11_1376 0.69 +0.4
66,620 - Ac3H11_1376 0.69 -0.2
66,620 - Ac3H11_1376 0.69 -1.0

Or see this region's nucleotide sequence