Experiment: acetate 68 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21835 and AO353_21840 are separated by 33 nucleotides AO353_21840 and AO353_21845 are separated by 63 nucleotides AO353_21845 and AO353_21850 are separated by 969 nucleotides
AO353_21835: AO353_21835 - excinuclease ABC subunit C, at 4,788,511 to 4,790,334
_21835
AO353_21840: AO353_21840 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 4,790,368 to 4,790,928
_21840
AO353_21845: AO353_21845 - tRNA-Gly, at 4,790,992 to 4,791,067
_21845
AO353_21850: AO353_21850 - diguanylate cyclase, at 4,792,037 to 4,793,551
_21850
Position (kb)
4790
4791
4792 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4790.026 kb on + strand, within AO353_21835 at 4790.027 kb on - strand, within AO353_21835 at 4790.149 kb on - strand, within AO353_21835 at 4790.311 kb on + strand at 4790.311 kb on + strand at 4790.311 kb on + strand at 4790.311 kb on + strand at 4790.311 kb on + strand at 4790.332 kb on + strand at 4790.332 kb on + strand at 4790.332 kb on + strand at 4790.969 kb on + strand at 4791.088 kb on + strand at 4791.088 kb on + strand at 4791.115 kb on - strand at 4791.115 kb on - strand at 4791.119 kb on + strand at 4791.119 kb on + strand at 4791.120 kb on - strand at 4791.125 kb on + strand at 4791.125 kb on + strand at 4791.125 kb on + strand at 4791.125 kb on + strand at 4791.126 kb on - strand at 4791.126 kb on - strand at 4791.126 kb on - strand at 4791.126 kb on - strand at 4791.126 kb on - strand at 4791.126 kb on - strand at 4791.142 kb on + strand at 4791.143 kb on - strand at 4791.161 kb on + strand at 4791.162 kb on - strand at 4791.192 kb on + strand at 4791.192 kb on + strand at 4791.193 kb on - strand at 4791.235 kb on + strand at 4791.235 kb on + strand at 4791.286 kb on - strand at 4791.302 kb on - strand at 4791.321 kb on + strand at 4791.322 kb on - strand at 4791.380 kb on - strand at 4791.409 kb on + strand at 4791.410 kb on - strand at 4791.410 kb on - strand at 4791.488 kb on + strand at 4791.727 kb on + strand at 4791.727 kb on + strand at 4791.728 kb on - strand at 4791.748 kb on - strand at 4791.768 kb on + strand at 4791.769 kb on - strand at 4791.769 kb on - strand at 4791.769 kb on - strand at 4791.769 kb on - strand at 4791.818 kb on + strand at 4791.818 kb on + strand at 4791.819 kb on - strand at 4791.827 kb on + strand at 4791.828 kb on - strand at 4791.851 kb on + strand at 4791.872 kb on + strand at 4791.872 kb on + strand at 4791.872 kb on + strand at 4791.872 kb on + strand at 4791.872 kb on + strand at 4791.872 kb on + strand at 4791.872 kb on + strand at 4791.872 kb on + strand at 4791.872 kb on + strand at 4791.872 kb on + strand at 4791.872 kb on + strand at 4791.873 kb on - strand at 4791.873 kb on - strand at 4791.873 kb on - strand at 4791.873 kb on - strand at 4791.873 kb on - strand at 4791.873 kb on - strand at 4791.873 kb on - strand at 4791.873 kb on - strand at 4791.950 kb on - strand at 4791.958 kb on - strand at 4791.958 kb on - strand at 4791.964 kb on + strand at 4791.964 kb on + strand at 4791.964 kb on + strand at 4791.964 kb on + strand at 4791.964 kb on + strand at 4791.964 kb on + strand at 4791.964 kb on + strand at 4791.964 kb on + strand at 4791.964 kb on + strand at 4791.964 kb on + strand at 4791.964 kb on + strand at 4791.965 kb on - strand at 4791.965 kb on - strand at 4791.965 kb on - strand at 4791.965 kb on - strand at 4791.965 kb on - strand at 4791.965 kb on - strand at 4791.965 kb on - strand at 4791.965 kb on - strand at 4791.965 kb on - strand at 4791.965 kb on - strand at 4791.965 kb on - strand at 4791.981 kb on + strand at 4792.002 kb on + strand at 4792.038 kb on + strand at 4792.038 kb on + strand at 4792.038 kb on + strand at 4792.038 kb on + strand at 4792.038 kb on + strand at 4792.038 kb on + strand at 4792.039 kb on - strand at 4792.063 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate 68 mM remove 4,790,026 + AO353_21835 0.83 +1.1 4,790,027 - AO353_21835 0.83 +1.0 4,790,149 - AO353_21835 0.90 -0.8 4,790,311 + -0.8 4,790,311 + +0.5 4,790,311 + +0.4 4,790,311 + +0.2 4,790,311 + -0.8 4,790,332 + +0.4 4,790,332 + -1.8 4,790,332 + +0.4 4,790,969 + +0.2 4,791,088 + +1.3 4,791,088 + -0.8 4,791,115 - -0.8 4,791,115 - +0.1 4,791,119 + -2.1 4,791,119 + -1.7 4,791,120 - -1.1 4,791,125 + -1.1 4,791,125 + -0.2 4,791,125 + +0.0 4,791,125 + +0.8 4,791,126 - +0.3 4,791,126 - -0.4 4,791,126 - +0.2 4,791,126 - +1.2 4,791,126 - -1.2 4,791,126 - -0.2 4,791,142 + -2.4 4,791,143 - +0.8 4,791,161 + +1.2 4,791,162 - -0.7 4,791,192 + -0.7 4,791,192 + -0.2 4,791,193 - +0.1 4,791,235 + +0.6 4,791,235 + +1.8 4,791,286 - -1.6 4,791,302 - -0.2 4,791,321 + +0.2 4,791,322 - -0.8 4,791,380 - -1.9 4,791,409 + -0.6 4,791,410 - -1.2 4,791,410 - +1.1 4,791,488 + +0.3 4,791,727 + +0.2 4,791,727 + +0.8 4,791,728 - -0.8 4,791,748 - +1.6 4,791,768 + -0.2 4,791,769 - +0.6 4,791,769 - +0.3 4,791,769 - +0.2 4,791,769 - +1.1 4,791,818 + -0.8 4,791,818 + -0.2 4,791,819 - +0.3 4,791,827 + -0.8 4,791,828 - -1.2 4,791,851 + +0.0 4,791,872 + +0.2 4,791,872 + -0.5 4,791,872 + +0.3 4,791,872 + +0.9 4,791,872 + +1.3 4,791,872 + +0.2 4,791,872 + -0.6 4,791,872 + -2.1 4,791,872 + +1.6 4,791,872 + -2.7 4,791,872 + -0.2 4,791,873 - +0.5 4,791,873 - +0.5 4,791,873 - -0.2 4,791,873 - -0.2 4,791,873 - -1.6 4,791,873 - -0.2 4,791,873 - -0.8 4,791,873 - -1.8 4,791,950 - -0.9 4,791,958 - +0.8 4,791,958 - +0.1 4,791,964 + -0.8 4,791,964 + -1.5 4,791,964 + -0.2 4,791,964 + +1.2 4,791,964 + +0.9 4,791,964 + -0.2 4,791,964 + -0.6 4,791,964 + -0.0 4,791,964 + +0.9 4,791,964 + -0.1 4,791,964 + -1.6 4,791,965 - +0.5 4,791,965 - -0.1 4,791,965 - -0.5 4,791,965 - -0.6 4,791,965 - -0.6 4,791,965 - +0.4 4,791,965 - -1.2 4,791,965 - -1.8 4,791,965 - -0.2 4,791,965 - +1.1 4,791,965 - -2.1 4,791,981 + -0.8 4,792,002 + +1.3 4,792,038 + -1.2 4,792,038 + +1.1 4,792,038 + -0.4 4,792,038 + -0.2 4,792,038 + +0.9 4,792,038 + -0.2 4,792,039 - -0.2 4,792,063 + +1.5
Or see this region's nucleotide sequence