Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_04835

Experiment: acetate 68 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate 68 mM
1,065,826	-		AO353_04825	0.14	-1.5
1,065,826	-		AO353_04825	0.14	-2.4
1,065,881	+		AO353_04825	0.21	-4.1
1,065,881	+		AO353_04825	0.21	-1.2
1,065,882	-		AO353_04825	0.21	-0.9
1,065,895	+		AO353_04825	0.22	-0.9
1,065,896	-		AO353_04825	0.22	-2.2
1,065,998	+		AO353_04825	0.34	-2.4
1,065,998	+		AO353_04825	0.34	-3.7
1,065,998	+		AO353_04825	0.34	-2.4
1,065,999	-		AO353_04825	0.34	-0.2
1,066,018	-		AO353_04825	0.36	-1.7
1,066,055	+		AO353_04825	0.41	-2.6
1,066,056	-		AO353_04825	0.41	-2.6
1,066,088	+		AO353_04825	0.45	-1.9
1,066,088	+		AO353_04825	0.45	-3.7
1,066,088	+		AO353_04825	0.45	+1.1
1,066,089	-		AO353_04825	0.45	-0.8
1,066,089	-		AO353_04825	0.45	-1.0
1,066,089	-		AO353_04825	0.45	-1.2
1,066,331	+		AO353_04825	0.73	-1.9
1,066,391	-		AO353_04825	0.80	-0.5
1,066,484	+				-0.9
1,066,484	+				-1.0
1,066,484	+				-2.1
1,066,484	+				-0.9
1,066,484	+				-0.5
1,066,484	+				-0.5
1,066,484	+				-3.5
1,066,484	+				-0.5
1,066,484	+				-2.1
1,066,484	+				-0.1
1,066,484	+				+0.1
1,066,484	+				-2.1
1,066,484	+				-0.9
1,066,484	+				-2.4
1,066,485	-				-1.7
1,066,485	-				+0.7
1,066,485	-				-1.5
1,066,485	-				-0.9
1,066,485	-				-2.1
1,066,485	-				-3.0
1,066,485	-				-2.1
1,066,485	-				+0.1
1,066,485	-				-1.9
1,066,485	-				-1.7
1,066,485	-				-2.1
1,066,485	-				-0.7
1,066,584	+				-0.5
1,066,584	+				-0.5
1,066,584	+				-0.5
1,066,585	-				+1.1
1,066,585	-				+0.4
1,066,585	-				-1.5
1,066,746	+		AO353_04830	0.84	-2.1
1,066,746	+		AO353_04830	0.84	+1.1
1,066,746	+		AO353_04830	0.84	-0.5
1,066,746	+		AO353_04830	0.84	-1.8
1,066,746	+		AO353_04830	0.84	-1.2
1,066,746	+		AO353_04830	0.84	-0.5
1,066,746	+		AO353_04830	0.84	-0.4
1,066,746	+		AO353_04830	0.84	-3.0
1,066,747	-		AO353_04830	0.85	-2.5
1,066,747	-		AO353_04830	0.85	-0.9
1,066,747	-		AO353_04830	0.85	-1.9
1,066,747	-		AO353_04830	0.85	-2.2
1,066,747	-		AO353_04830	0.85	-1.9
1,066,747	-		AO353_04830	0.85	-1.7
1,066,747	-		AO353_04830	0.85	-0.5
1,066,747	-		AO353_04830	0.85	-1.4
1,066,747	-		AO353_04830	0.85	-1.6
1,066,747	-		AO353_04830	0.85	-2.7
1,066,855	+				-3.2
1,066,855	+				-1.7
1,066,855	+				-2.1
1,066,855	+				-1.1
1,066,855	+				-3.0
1,066,856	-				+0.1
1,066,856	-				-2.1
1,066,856	-				-0.5
1,066,856	-				-3.0
1,066,856	-				-2.6
1,066,856	-				-0.7
1,066,856	-				-1.6
1,066,856	-				-1.1
1,066,856	-				-2.5
1,066,856	-				-3.6
1,067,051	-		AO353_04835	0.13	+0.5
1,067,156	+		AO353_04835	0.18	+0.1
1,067,156	+		AO353_04835	0.18	-0.7
1,067,157	-		AO353_04835	0.18	-2.1
1,067,157	-		AO353_04835	0.18	-1.6
1,067,179	+		AO353_04835	0.19	-3.1
1,067,179	+		AO353_04835	0.19	-1.1
1,067,179	+		AO353_04835	0.19	-2.1
1,067,180	-		AO353_04835	0.19	-2.4
1,067,180	-		AO353_04835	0.19	-2.1
1,067,371	+		AO353_04835	0.28	-2.4
1,067,372	-		AO353_04835	0.28	+0.1
1,067,372	-		AO353_04835	0.28	-1.7
1,067,372	-		AO353_04835	0.28	+1.1
1,067,372	-		AO353_04835	0.28	+0.5
1,067,372	-		AO353_04835	0.28	-1.7
1,067,372	-		AO353_04835	0.28	-1.9
1,067,372	-		AO353_04835	0.28	-3.0
1,067,389	+		AO353_04835	0.28	-1.7
1,067,389	+		AO353_04835	0.28	-1.6
1,067,390	-		AO353_04835	0.28	-1.9
1,067,390	-		AO353_04835	0.28	-1.5
1,067,390	-		AO353_04835	0.28	-0.9
1,067,398	+		AO353_04835	0.29	-2.2
1,067,398	+		AO353_04835	0.29	-2.5
1,067,399	-		AO353_04835	0.29	-1.7
1,067,399	-		AO353_04835	0.29	+0.1
1,067,399	-		AO353_04835	0.29	-2.2
1,067,467	+		AO353_04835	0.32	+1.5
1,067,467	+		AO353_04835	0.32	-1.5
1,067,720	-		AO353_04835	0.44	-0.9
1,067,720	-		AO353_04835	0.44	-0.3
1,067,797	+		AO353_04835	0.47	-0.5
1,067,797	+		AO353_04835	0.47	-2.7
1,067,797	+		AO353_04835	0.47	+0.7
1,067,797	+		AO353_04835	0.47	-2.2
1,067,798	-		AO353_04835	0.47	-1.2
1,067,798	-		AO353_04835	0.47	-2.2
1,067,798	-		AO353_04835	0.47	-1.7
1,067,860	+		AO353_04835	0.50	+0.1
1,067,860	+		AO353_04835	0.50	-0.5
1,067,860	+		AO353_04835	0.50	-0.5
1,067,860	+		AO353_04835	0.50	-1.7
1,067,860	+		AO353_04835	0.50	-0.5
1,067,860	+		AO353_04835	0.50	-1.2
1,067,861	-		AO353_04835	0.50	-1.2
1,067,861	-		AO353_04835	0.50	-1.7
1,067,861	-		AO353_04835	0.50	-2.3
1,067,861	-		AO353_04835	0.50	+1.1
1,067,861	-		AO353_04835	0.50	-1.2
1,067,888	-		AO353_04835	0.51	-1.1
1,067,899	+		AO353_04835	0.52	-1.2
1,067,899	+		AO353_04835	0.52	+0.7
1,067,993	+		AO353_04835	0.56	-3.2
1,067,993	+		AO353_04835	0.56	+1.1
1,067,994	-		AO353_04835	0.56	-2.4
1,067,994	-		AO353_04835	0.56	-1.7
1,067,995	+		AO353_04835	0.56	-2.8
1,067,996	-		AO353_04835	0.56	-0.9
1,067,996	-		AO353_04835	0.56	-0.7
1,068,108	+		AO353_04835	0.61	-0.7
1,068,108	+		AO353_04835	0.61	-0.5
1,068,109	-		AO353_04835	0.61	-1.0
1,068,379	+		AO353_04835	0.74	-1.6
1,068,379	+		AO353_04835	0.74	+0.1
1,068,379	+		AO353_04835	0.74	-0.9
1,068,379	+		AO353_04835	0.74	-3.2
1,068,379	+		AO353_04835	0.74	-1.5
1,068,379	+		AO353_04835	0.74	-1.9
1,068,380	-		AO353_04835	0.74	-2.1
1,068,380	-		AO353_04835	0.74	-2.6
1,068,380	-		AO353_04835	0.74	-2.4
1,068,380	-		AO353_04835	0.74	-2.1
1,068,380	-		AO353_04835	0.74	-1.2
1,068,380	-		AO353_04835	0.74	-3.7
1,068,542	+		AO353_04835	0.81	-2.7
1,068,542	+		AO353_04835	0.81	-0.9
1,068,543	-		AO353_04835	0.81	-2.4
1,068,544	+		AO353_04835	0.81	-2.8
1,068,545	-		AO353_04835	0.81	-1.6
1,068,715	+		AO353_04835	0.89	-1.1
1,068,715	+		AO353_04835	0.89	-3.8
1,068,716	-		AO353_04835	0.89	-1.7
1,068,856	+				-1.4
1,068,856	+				+0.1
1,068,856	+				-1.4
1,068,856	+				-1.0
1,068,856	+				-1.9
1,068,856	+				-1.9
1,068,857	-				-2.4
1,068,919	+				-1.9
1,068,919	+				-2.6
1,068,919	+				-0.5
1,068,919	+				-1.5
1,068,919	+				-1.5
1,068,920	-				+0.1
1,068,920	-				-1.3
1,068,920	-				+0.5
1,069,163	+		AO353_04840	0.13	-0.5
1,069,163	+		AO353_04840	0.13	-1.7
1,069,163	+		AO353_04840	0.13	-1.5
1,069,184	+		AO353_04840	0.15	-1.2
1,069,205	+		AO353_04840	0.16	-1.2
1,069,205	+		AO353_04840	0.16	-2.5
1,069,205	+		AO353_04840	0.16	-2.4
1,069,206	-		AO353_04840	0.16	-0.9
1,069,206	-		AO353_04840	0.16	-0.5
1,069,206	-		AO353_04840	0.16	-1.7
1,069,206	-		AO353_04840	0.16	-0.5
1,069,322	+		AO353_04840	0.24	-0.7
1,069,322	+		AO353_04840	0.24	-2.4
1,069,322	+		AO353_04840	0.24	-0.9
1,069,322	+		AO353_04840	0.24	-2.3
1,069,322	+		AO353_04840	0.24	-3.4
1,069,323	-		AO353_04840	0.24	-0.9
1,069,323	-		AO353_04840	0.24	-0.9
1,069,323	-		AO353_04840	0.24	-1.9
1,069,424	+		AO353_04840	0.30	-1.0
1,069,424	+		AO353_04840	0.30	-1.9
1,069,424	+		AO353_04840	0.30	-2.2
1,069,424	+		AO353_04840	0.30	-1.2
1,069,424	+		AO353_04840	0.30	-1.1
1,069,424	+		AO353_04840	0.30	-1.7
1,069,424	+		AO353_04840	0.30	-0.5
1,069,425	-		AO353_04840	0.30	-1.2
1,069,425	-		AO353_04840	0.30	-1.7
1,069,425	-		AO353_04840	0.30	-1.9
1,069,425	-		AO353_04840	0.30	-4.2
1,069,425	-		AO353_04840	0.30	+0.1
1,069,425	-		AO353_04840	0.30	-1.8
1,069,425	-		AO353_04840	0.30	+1.1
1,069,478	+		AO353_04840	0.34	-0.9
1,069,478	+		AO353_04840	0.34	-1.2
1,069,478	+		AO353_04840	0.34	-1.1
1,069,478	+		AO353_04840	0.34	-0.3
1,069,479	-		AO353_04840	0.34	+1.1
1,069,479	-		AO353_04840	0.34	-1.5
1,069,479	-		AO353_04840	0.34	-1.7
1,069,479	-		AO353_04840	0.34	-2.1
1,069,479	-		AO353_04840	0.34	-3.6
1,069,479	-		AO353_04840	0.34	-1.2
1,069,479	-		AO353_04840	0.34	-1.2
1,069,621	+		AO353_04840	0.43	-0.5
1,069,621	+		AO353_04840	0.43	-1.9
1,069,621	+		AO353_04840	0.43	-2.6
1,069,621	+		AO353_04840	0.43	-1.7
1,069,622	-		AO353_04840	0.44	-1.2
1,069,622	-		AO353_04840	0.44	-3.3
1,069,889	+		AO353_04840	0.61	-1.9
1,069,910	+		AO353_04840	0.63	-2.5
1,069,910	+		AO353_04840	0.63	-1.2
1,069,910	+		AO353_04840	0.63	-1.9
1,069,910	+		AO353_04840	0.63	-0.9
1,069,910	+		AO353_04840	0.63	-2.2
1,069,911	-		AO353_04840	0.63	-0.2
1,069,911	-		AO353_04840	0.63	-1.2
1,069,911	-		AO353_04840	0.63	+0.1
1,069,911	-		AO353_04840	0.63	-3.4
1,069,911	-		AO353_04840	0.63	-2.2