Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34610
Experiment: R2A with Chlorite 4 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | R2A with Chlorite 4 mM |
|---|---|---|---|---|---|
| remove | |||||
| 3,205,605 | - | +0.4 | |||
| 3,205,614 | + | +0.3 | |||
| 3,205,624 | - | RR42_RS34605 | 0.10 | +1.0 | |
| 3,205,624 | - | RR42_RS34605 | 0.10 | +2.5 | |
| 3,205,870 | - | RR42_RS34605 | 0.37 | +0.0 | |
| 3,206,047 | - | RR42_RS34605 | 0.57 | +0.4 | |
| 3,206,124 | + | RR42_RS34605 | 0.66 | +0.3 | |
| 3,206,412 | + | -0.1 | |||
| 3,206,412 | + | -1.3 | |||
| 3,206,412 | + | -0.5 | |||
| 3,206,412 | + | -0.2 | |||
| 3,206,495 | - | +0.3 | |||
| 3,206,590 | + | +0.5 | |||
| 3,206,593 | - | +0.9 | |||
| 3,206,593 | - | -0.3 | |||
| 3,206,870 | + | RR42_RS34610 | 0.29 | -0.8 | |
| 3,206,871 | - | RR42_RS34610 | 0.29 | -0.9 | |
| 3,206,871 | - | RR42_RS34610 | 0.29 | +0.1 | |
| 3,208,382 | + | +0.5 |
Or see this region's nucleotide sequence