Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33670

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
2,980,630	+				+0.2
2,980,630	+				+0.2
2,980,630	+				-0.1
2,980,631	-		RR42_RS33665	0.10	-0.8
2,980,693	-		RR42_RS33665	0.17	+0.6
2,980,946	-		RR42_RS33665	0.45	-1.8
2,981,035	+		RR42_RS33665	0.55	-0.1
2,981,035	+		RR42_RS33665	0.55	-0.5
2,981,035	+		RR42_RS33665	0.55	+0.7
2,981,036	-		RR42_RS33665	0.55	-1.0
2,981,036	-		RR42_RS33665	0.55	-0.1
2,981,036	-		RR42_RS33665	0.55	+0.4
2,981,036	-		RR42_RS33665	0.55	-0.3
2,981,083	+		RR42_RS33665	0.60	-0.1
2,981,083	+		RR42_RS33665	0.60	+0.4
2,981,084	-		RR42_RS33665	0.60	+0.6
2,981,186	-		RR42_RS33665	0.72	+0.3
2,981,186	-		RR42_RS33665	0.72	-0.5
2,981,227	-		RR42_RS33665	0.76	+0.1
2,981,382	-				-0.2
2,981,410	-				+0.2
2,981,469	+				-0.8
2,981,470	-				-0.2
2,981,540	+				-0.5
2,981,540	+				-0.3
2,981,540	+				-0.2
2,981,540	+				+0.8
2,981,541	-				+0.1
2,981,541	-				+1.2
2,981,541	-				+0.3
2,981,601	+				-1.2
2,981,601	+				-0.4
2,981,602	-				-0.3
2,981,603	+				+0.5
2,981,603	+				+0.0
2,981,603	+				-0.5
2,981,603	+				-1.5
2,981,975	+		RR42_RS33670	0.50	+0.1
2,981,975	+		RR42_RS33670	0.50	-0.5
2,981,999	+		RR42_RS33670	0.53	+0.2
2,981,999	+		RR42_RS33670	0.53	+0.3
2,982,000	-		RR42_RS33670	0.53	+0.0
2,982,177	+		RR42_RS33670	0.73	-0.6
2,982,178	-		RR42_RS33670	0.73	-1.6
2,982,543	+		RR42_RS33675	0.15	+0.3
2,982,543	+		RR42_RS33675	0.15	-0.1
2,982,543	+		RR42_RS33675	0.15	+0.4
2,982,544	-		RR42_RS33675	0.15	-0.1
2,982,544	-		RR42_RS33675	0.15	-0.6
2,982,547	+		RR42_RS33675	0.16	+0.4
2,982,547	+		RR42_RS33675	0.16	-0.1
2,982,548	-		RR42_RS33675	0.16	-0.0
2,982,548	-		RR42_RS33675	0.16	+0.4
2,982,801	+		RR42_RS33675	0.48	-0.3
2,983,050	-		RR42_RS33675	0.80	-2.1
2,983,050	-		RR42_RS33675	0.80	+0.6
2,983,164	+				-0.9
2,983,201	+				+0.0
2,983,202	-				-0.0
2,983,202	-				-0.5
2,983,335	-				+0.5