Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28965

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
1,855,245	-				+0.5
1,855,245	-				+0.7
1,855,320	+		RR42_RS28955	0.34	-0.4
1,855,321	-		RR42_RS28955	0.34	+1.7
1,855,321	-		RR42_RS28955	0.34	+1.1
1,855,398	+		RR42_RS28955	0.61	+0.1
1,855,398	+		RR42_RS28955	0.61	+0.4
1,855,416	+		RR42_RS28955	0.68	+0.6
1,855,417	-		RR42_RS28955	0.68	+1.2
1,855,505	-				-0.4
1,855,505	-				-0.2
1,855,559	+				+0.5
1,855,560	-				+0.4
1,855,795	+		RR42_RS28960	0.20	-1.2
1,855,795	+		RR42_RS28960	0.20	+0.9
1,855,796	-		RR42_RS28960	0.20	+0.6
1,855,813	+		RR42_RS28960	0.23	+0.4
1,855,813	+		RR42_RS28960	0.23	-1.3
1,855,813	+		RR42_RS28960	0.23	+0.7
1,855,813	+		RR42_RS28960	0.23	-0.3
1,855,813	+		RR42_RS28960	0.23	-0.5
1,855,843	+		RR42_RS28960	0.30	-0.3
1,855,980	+		RR42_RS28960	0.58	-0.2
1,856,018	-		RR42_RS28960	0.66	-0.5
1,856,018	-		RR42_RS28960	0.66	-0.4
1,856,018	-		RR42_RS28960	0.66	-0.5
1,856,399	+		RR42_RS28965	0.34	+0.9
1,856,400	-		RR42_RS28965	0.34	+0.3
1,856,400	-		RR42_RS28965	0.34	+1.0
1,856,400	-		RR42_RS28965	0.34	-0.1
1,856,602	+		RR42_RS28965	0.77	+0.7
1,856,602	+		RR42_RS28965	0.77	-2.0
1,856,603	-				+0.5
1,856,603	-		RR42_RS28965	0.78	+1.0
1,856,613	-		RR42_RS28965	0.80	-0.7
1,856,621	+		RR42_RS28965	0.81	-0.0
1,856,621	+		RR42_RS28965	0.81	+1.3
1,856,622	-		RR42_RS28965	0.82	+0.3
1,856,622	-		RR42_RS28965	0.82	-0.3
1,856,656	+		RR42_RS28965	0.89	-0.1
1,856,705	+				-0.2
1,856,705	+				+0.6
1,856,705	+				+0.4
1,856,705	+				-0.5
1,856,705	+				+0.6
1,856,705	+				+0.2
1,856,705	+				+0.6
1,856,706	-				+0.1
1,856,706	-				-0.2
1,856,706	-				+0.9
1,856,879	+		RR42_RS28970	0.14	-0.3
1,857,237	+		RR42_RS28970	0.62	-0.3
1,857,238	-		RR42_RS28970	0.62	-0.7
1,857,238	-		RR42_RS28970	0.62	-0.6
1,857,238	-		RR42_RS28970	0.62	-0.3
1,857,325	-		RR42_RS28970	0.73	+1.0
1,857,348	-		RR42_RS28970	0.76	-1.2
1,857,544	+				-1.0
1,857,544	+				+1.3
1,857,544	+				-0.1
1,857,545	-				+0.3