Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28800

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
1,811,355	+				+0.2
1,811,355	+				-2.3
1,811,356	-				+0.5
1,811,574	-				+0.6
1,811,591	-				-0.4
1,811,597	+				-0.5
1,811,597	+				-0.6
1,811,597	+				+0.2
1,811,597	+				-0.1
1,811,598	-				-0.1
1,811,598	-				+0.5
1,811,598	-				+0.3
1,811,601	-				+0.5
1,811,601	-				+0.3
1,811,611	-				+0.9
1,811,701	-		RR42_RS28795	0.24	+0.1
1,811,701	-		RR42_RS28795	0.24	+0.6
1,811,724	+		RR42_RS28795	0.35	-0.2
1,811,725	-		RR42_RS28795	0.35	-0.0
1,811,735	-		RR42_RS28795	0.40	-1.2
1,811,735	-		RR42_RS28795	0.40	-0.1
1,811,765	+		RR42_RS28795	0.53	-0.3
1,811,766	-		RR42_RS28795	0.54	+0.2
1,811,766	-		RR42_RS28795	0.54	-0.3
1,811,766	-		RR42_RS28795	0.54	-1.1
1,811,779	-		RR42_RS28795	0.60	-0.1
1,811,779	-		RR42_RS28795	0.60	+0.1
1,811,779	-		RR42_RS28795	0.60	+1.5
1,811,864	+				-0.8
1,811,865	-				-0.2
1,811,907	+				+0.5
1,812,129	+				+0.6
1,812,129	+				-1.2
1,812,130	-				+0.6
1,812,148	-				+1.4
1,812,180	+				+3.7
1,812,181	-				+0.2
1,812,300	-				-0.5
1,812,300	-				-0.8
1,812,300	-				-1.0
1,812,300	-				+0.2
1,812,471	+		RR42_RS28800	0.14	-0.2
1,812,534	+		RR42_RS28800	0.17	+0.3
1,812,618	+		RR42_RS28800	0.21	-0.8
1,812,619	-		RR42_RS28800	0.21	+0.1
1,812,702	+		RR42_RS28800	0.25	+0.3
1,812,703	-		RR42_RS28800	0.25	+1.3
1,812,864	+		RR42_RS28800	0.32	-0.6
1,812,864	+		RR42_RS28800	0.32	-0.4
1,812,864	+		RR42_RS28800	0.32	+2.5
1,812,864	+		RR42_RS28800	0.32	-2.9
1,812,864	+		RR42_RS28800	0.32	+0.3
1,812,864	+		RR42_RS28800	0.32	-2.0
1,812,865	-		RR42_RS28800	0.32	-0.6
1,813,059	+		RR42_RS28800	0.40	+0.4
1,813,060	-		RR42_RS28800	0.41	+0.3
1,813,060	-		RR42_RS28800	0.41	-0.8
1,813,060	-		RR42_RS28800	0.41	-0.2
1,813,416	+		RR42_RS28800	0.56	+2.0
1,813,417	-		RR42_RS28800	0.56	+0.3
1,813,417	-		RR42_RS28800	0.56	+0.2
1,813,417	-		RR42_RS28800	0.56	+0.1
1,813,675	-		RR42_RS28800	0.68	+0.1
1,813,675	-		RR42_RS28800	0.68	+0.7
1,813,675	-		RR42_RS28800	0.68	+0.5
1,813,806	+		RR42_RS28800	0.74	-0.0
1,813,893	+		RR42_RS28800	0.78	-0.7
1,813,893	+		RR42_RS28800	0.78	+0.5
1,813,894	-		RR42_RS28800	0.78	+0.3
1,813,894	-		RR42_RS28800	0.78	+0.3
1,813,894	-		RR42_RS28800	0.78	-0.5
1,814,145	+		RR42_RS28800	0.89	-0.8
1,814,157	+		RR42_RS28800	0.90	-0.7
1,814,157	+		RR42_RS28800	0.90	-0.1
1,814,307	+				+0.2
1,814,307	+				+0.2
1,814,307	+				+0.3
1,814,307	+				-0.2
1,814,307	+				-0.9
1,814,307	+				-0.9
1,814,308	-				+0.2
1,814,308	-				-0.3
1,814,388	+				+1.1
1,814,495	-				+0.2
1,814,549	+				+0.7
1,814,557	+				-0.7
1,814,557	+				+0.2
1,814,557	+				-1.5
1,814,846	+		RR42_RS28805	0.34	-0.5
1,814,931	-		RR42_RS28805	0.42	-0.7
1,814,931	-		RR42_RS28805	0.42	-0.9
1,815,017	+		RR42_RS28805	0.51	-0.2
1,815,017	+		RR42_RS28805	0.51	+0.4
1,815,104	-		RR42_RS28805	0.59	+0.0
1,815,104	-		RR42_RS28805	0.59	-0.2
1,815,221	+		RR42_RS28805	0.71	-0.7
1,815,221	+		RR42_RS28805	0.71	-0.1
1,815,222	-		RR42_RS28805	0.71	-0.2
1,815,222	-		RR42_RS28805	0.71	-1.1
1,815,293	-		RR42_RS28805	0.78	-0.8
1,815,324	+		RR42_RS28805	0.81	-0.3