Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27910
Experiment: R2A with Chlorite 4 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Chlorite 4 mM |
---|---|---|---|---|---|
remove | |||||
1,623,066 | + | -0.6 | |||
1,623,067 | - | +0.0 | |||
1,623,067 | - | -0.3 | |||
1,623,086 | - | -1.4 | |||
1,623,165 | + | -0.8 | |||
1,623,165 | + | +0.2 | |||
1,623,351 | + | RR42_RS27905 | 0.29 | +0.1 | |
1,623,352 | - | RR42_RS27905 | 0.29 | -0.5 | |
1,623,352 | - | RR42_RS27905 | 0.29 | +0.3 | |
1,623,352 | - | RR42_RS27905 | 0.29 | -0.6 | |
1,623,692 | + | RR42_RS27905 | 0.81 | -1.1 | |
1,623,693 | - | RR42_RS27905 | 0.82 | +0.3 | |
1,623,875 | + | +0.2 | |||
1,623,965 | + | -0.2 | |||
1,624,026 | - | -0.3 | |||
1,624,309 | - | RR42_RS27910 | 0.49 | -0.3 | |
1,624,461 | - | RR42_RS27910 | 0.71 | -0.5 | |
1,624,666 | - | +0.2 | |||
1,624,804 | + | -0.0 | |||
1,624,972 | + | +0.1 | |||
1,624,973 | - | +0.2 | |||
1,624,973 | - | -0.3 |
Or see this region's nucleotide sequence