Experiment: R2A with Chlorite 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS21465 and RR42_RS21470 are separated by 97 nucleotides
RR42_RS21465: RR42_RS21465 - hypothetical protein, at 145,872 to 146,066
_RS21465
RR42_RS21470: RR42_RS21470 - hypothetical protein, at 146,164 to 146,538
_RS21470
Position (kb)
146
147 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 145.192 kb on + strand at 145.192 kb on + strand at 145.192 kb on + strand at 145.204 kb on + strand at 145.204 kb on + strand at 145.205 kb on - strand at 145.243 kb on - strand at 145.326 kb on - strand at 145.561 kb on + strand at 145.593 kb on + strand at 145.595 kb on + strand at 145.640 kb on - strand at 145.668 kb on + strand at 145.686 kb on + strand at 145.687 kb on - strand at 145.700 kb on + strand at 145.700 kb on + strand at 145.724 kb on + strand at 145.903 kb on + strand, within RR42_RS21465 at 145.903 kb on + strand, within RR42_RS21465 at 145.904 kb on - strand, within RR42_RS21465 at 145.939 kb on + strand, within RR42_RS21465 at 145.939 kb on - strand, within RR42_RS21465 at 145.939 kb on - strand, within RR42_RS21465 at 145.939 kb on - strand, within RR42_RS21465 at 145.951 kb on - strand, within RR42_RS21465 at 145.951 kb on - strand, within RR42_RS21465 at 145.998 kb on - strand, within RR42_RS21465 at 145.998 kb on - strand, within RR42_RS21465 at 146.064 kb on + strand at 146.065 kb on - strand at 146.065 kb on - strand at 146.065 kb on - strand at 146.065 kb on - strand at 146.065 kb on - strand at 146.335 kb on + strand, within RR42_RS21470 at 146.386 kb on + strand, within RR42_RS21470 at 146.685 kb on + strand at 146.686 kb on - strand at 146.686 kb on - strand at 146.686 kb on - strand at 146.686 kb on - strand at 146.700 kb on + strand at 146.701 kb on - strand at 146.727 kb on + strand at 146.802 kb on + strand at 146.802 kb on + strand at 146.808 kb on + strand at 146.808 kb on + strand at 146.808 kb on + strand at 146.808 kb on + strand at 146.808 kb on + strand at 146.809 kb on - strand at 146.809 kb on - strand at 146.844 kb on + strand at 146.919 kb on + strand at 146.919 kb on + strand at 146.919 kb on + strand at 146.919 kb on + strand at 146.920 kb on - strand at 146.920 kb on - strand at 146.950 kb on + strand at 146.992 kb on - strand at 147.066 kb on + strand at 147.066 kb on + strand at 147.099 kb on + strand at 147.133 kb on - strand at 147.149 kb on - strand at 147.192 kb on + strand at 147.192 kb on + strand at 147.192 kb on + strand at 147.192 kb on + strand at 147.193 kb on - strand at 147.193 kb on - strand at 147.193 kb on - strand at 147.193 kb on - strand at 147.234 kb on + strand at 147.235 kb on - strand at 147.235 kb on - strand at 147.286 kb on - strand at 147.286 kb on - strand at 147.303 kb on + strand at 147.303 kb on + strand at 147.303 kb on + strand at 147.303 kb on + strand at 147.304 kb on - strand at 147.331 kb on + strand at 147.360 kb on + strand at 147.411 kb on + strand at 147.411 kb on + strand at 147.412 kb on - strand at 147.412 kb on - strand at 147.412 kb on - strand at 147.412 kb on - strand at 147.488 kb on + strand at 147.488 kb on + strand at 147.488 kb on + strand at 147.488 kb on + strand at 147.489 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Chlorite 4 mM remove 145,192 + +0.3 145,192 + +0.1 145,192 + -0.4 145,204 + -0.6 145,204 + +0.7 145,205 - -0.5 145,243 - -0.2 145,326 - -0.2 145,561 + -0.2 145,593 + +1.0 145,595 + +0.0 145,640 - +0.0 145,668 + +0.3 145,686 + +0.0 145,687 - -0.8 145,700 + -1.1 145,700 + -0.3 145,724 + +1.1 145,903 + RR42_RS21465 0.16 -0.3 145,903 + RR42_RS21465 0.16 +0.0 145,904 - RR42_RS21465 0.16 -1.1 145,939 + RR42_RS21465 0.34 -0.4 145,939 - RR42_RS21465 0.34 +0.8 145,939 - RR42_RS21465 0.34 +0.6 145,939 - RR42_RS21465 0.34 -0.6 145,951 - RR42_RS21465 0.41 -0.4 145,951 - RR42_RS21465 0.41 +0.6 145,998 - RR42_RS21465 0.65 -0.8 145,998 - RR42_RS21465 0.65 +0.0 146,064 + +0.5 146,065 - +0.1 146,065 - +0.4 146,065 - -0.7 146,065 - +0.2 146,065 - +0.0 146,335 + RR42_RS21470 0.46 -2.0 146,386 + RR42_RS21470 0.59 -0.5 146,685 + +0.2 146,686 - -0.0 146,686 - +1.3 146,686 - -0.2 146,686 - +0.1 146,700 + -0.1 146,701 - +2.1 146,727 + -0.3 146,802 + -0.1 146,802 + +0.5 146,808 + -0.4 146,808 + +0.0 146,808 + -0.4 146,808 + +0.1 146,808 + -1.3 146,809 - -0.2 146,809 - -0.3 146,844 + +0.3 146,919 + -0.3 146,919 + -0.3 146,919 + -0.8 146,919 + -0.3 146,920 - +0.4 146,920 - -1.3 146,950 + -0.3 146,992 - -2.7 147,066 + +0.2 147,066 + +0.5 147,099 + +1.3 147,133 - -0.4 147,149 - +0.5 147,192 + -0.8 147,192 + +0.1 147,192 + -1.1 147,192 + -0.1 147,193 - -1.0 147,193 - +0.0 147,193 - -1.8 147,193 - -0.3 147,234 + +2.1 147,235 - -1.7 147,235 - -0.1 147,286 - -0.3 147,286 - -0.5 147,303 + -0.1 147,303 + -0.2 147,303 + -1.3 147,303 + -0.6 147,304 - -0.1 147,331 + -0.6 147,360 + -0.0 147,411 + +0.2 147,411 + -0.7 147,412 - +0.8 147,412 - -1.5 147,412 - -0.3 147,412 - -0.2 147,488 + +0.5 147,488 + -0.7 147,488 + +0.3 147,488 + -0.5 147,489 - -0.4
Or see this region's nucleotide sequence