Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19635

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
4,243,512	+		RR42_RS19630	0.58	-0.4
4,243,662	+		RR42_RS19630	0.83	-1.0
4,243,662	+		RR42_RS19630	0.83	-2.0
4,243,662	+		RR42_RS19630	0.83	-1.0
4,243,663	-		RR42_RS19630	0.83	+0.4
4,243,663	-		RR42_RS19630	0.83	+0.6
4,243,663	-		RR42_RS19630	0.83	-0.4
4,243,773	-				+1.3
4,243,800	+				+0.1
4,243,800	+				+0.8
4,243,801	-				-0.4
4,243,801	-				+0.5
4,243,801	-				+0.3
4,243,801	-				-1.5
4,243,841	+				+0.3
4,243,841	+				-0.1
4,243,841	+				-0.7
4,243,841	+				-2.1
4,243,842	-				-0.3
4,243,842	-				-0.4
4,243,845	+				-0.8
4,243,846	-				-0.6
4,243,846	-				-0.0
4,243,846	-				-0.6
4,243,846	-				-0.0
4,243,846	-				+0.7
4,243,846	-				-0.5
4,243,875	+				+0.1
4,243,875	+				+0.2
4,243,875	+				-0.3
4,243,876	-				+0.1
4,243,876	-				-0.7
4,243,876	-				-0.3
4,243,877	+				-0.6
4,243,912	+				-0.2
4,243,913	-				-0.5
4,243,923	+				+0.9
4,243,923	+				-0.7
4,243,923	+				-0.9
4,243,924	-				-0.3
4,243,931	+				-0.1
4,243,932	-				-0.2
4,243,933	+				-0.3
4,243,933	+				-0.5
4,243,933	+				-0.3
4,243,933	+				+0.4
4,243,933	+				+0.1
4,243,934	-				+0.7
4,243,934	-				+0.4
4,243,934	-				-0.1
4,243,934	-				+0.9
4,243,934	-				+0.1
4,243,936	+				+0.1
4,243,936	+				-1.4
4,243,936	+				+1.2
4,243,936	+				+0.9
4,243,936	+				+0.7
4,243,936	+				-0.3
4,243,937	-				+0.6
4,243,937	-				-0.1
4,243,939	+				-0.0
4,243,969	+				-0.7
4,243,969	+				+0.1
4,244,027	-				+0.6
4,244,027	-				+0.1
4,244,044	+				+0.2
4,244,045	-				+0.3
4,244,048	+				+1.4
4,244,049	-				-0.1
4,244,057	+				+0.3
4,244,057	+				+0.1
4,244,057	+				-0.8
4,244,058	-				+0.3
4,244,058	-				-0.4
4,244,058	-				+0.1
4,244,058	-				+0.2
4,244,060	-				-0.5
4,244,060	-				-1.3
4,244,095	-				+0.4
4,244,297	+				+0.2
4,244,548	+		RR42_RS19635	0.32	-0.9
4,244,548	+		RR42_RS19635	0.32	-0.1
4,244,635	+		RR42_RS19635	0.75	-0.4
4,244,636	-		RR42_RS19635	0.75	+0.2
4,244,859	+				+0.5
4,244,860	-				-0.3
4,244,933	-				+1.2
4,244,933	-				+0.1
4,244,933	-				-0.2
4,244,946	+				+0.6
4,244,946	+				+0.0
4,244,946	+				-0.0
4,244,947	-				+0.0
4,244,947	-				+0.4
4,244,947	-				+0.8
4,244,947	-				-1.9
4,244,961	+				+0.2
4,244,961	+				+0.4
4,244,961	+				+0.4
4,244,962	-				+0.1
4,245,032	+				+1.0
4,245,032	+				+1.9
4,245,090	+				+0.7
4,245,090	+				-0.1
4,245,091	-				-0.9
4,245,091	-				-0.4
4,245,418	+		RR42_RS19640	0.29	-0.1
4,245,418	+		RR42_RS19640	0.29	+0.7
4,245,418	+		RR42_RS19640	0.29	+0.2
4,245,418	+		RR42_RS19640	0.29	+0.2
4,245,418	+		RR42_RS19640	0.29	+0.1
4,245,418	+		RR42_RS19640	0.29	-0.3
4,245,418	+		RR42_RS19640	0.29	-1.0
4,245,578	+		RR42_RS19640	0.45	+0.1
4,245,606	+		RR42_RS19640	0.48	-0.1
4,245,606	+		RR42_RS19640	0.48	+0.5