Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17635

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
3,815,454	-				-0.4
3,815,490	+				-0.2
3,815,491	-				+0.2
3,815,491	-				+0.9
3,815,491	-				-0.2
3,815,533	+				+0.5
3,815,681	+				-0.7
3,815,681	+				+0.2
3,815,681	+				-0.7
3,815,720	+				-0.2
3,815,720	+				+0.1
3,815,721	-				+1.3
3,815,735	+				-1.1
3,815,735	+				-0.5
3,815,735	+				+0.3
3,815,736	-				+0.1
3,815,746	+				+0.1
3,815,881	+				+0.2
3,815,881	+				-0.8
3,815,882	-				+0.1
3,815,882	-				-0.2
3,815,937	-				-0.3
3,815,947	+				-0.5
3,815,947	+				-0.1
3,816,287	+		RR42_RS17635	0.15	-1.1
3,816,287	+		RR42_RS17635	0.15	-1.0
3,816,338	-		RR42_RS17635	0.21	-0.6
3,816,553	+		RR42_RS17635	0.43	+0.3
3,816,598	+		RR42_RS17635	0.48	-2.0
3,816,599	-		RR42_RS17635	0.48	+0.2
3,816,973	+		RR42_RS17635	0.87	-1.9
3,816,974	-		RR42_RS17635	0.87	-2.7
3,817,073	-				-0.3
3,817,073	-				-0.2
3,817,073	-				+0.3
3,817,207	+		RR42_RS17640	0.12	-0.0
3,817,207	+		RR42_RS17640	0.12	+0.3
3,817,207	+		RR42_RS17640	0.12	-0.5
3,817,207	+		RR42_RS17640	0.12	-0.3
3,817,207	+		RR42_RS17640	0.12	-0.2
3,817,207	+		RR42_RS17640	0.12	-0.8
3,817,208	-		RR42_RS17640	0.12	-0.1
3,817,208	-		RR42_RS17640	0.12	+1.0
3,817,300	+		RR42_RS17640	0.25	-0.4
3,817,300	+		RR42_RS17640	0.25	+0.3
3,817,301	-		RR42_RS17640	0.25	+0.1
3,817,301	-		RR42_RS17640	0.25	-0.5
3,817,301	-		RR42_RS17640	0.25	+0.2
3,817,360	+		RR42_RS17640	0.33	-0.3
3,817,361	-		RR42_RS17640	0.34	+0.7
3,817,361	-		RR42_RS17640	0.34	+1.3
3,817,373	+		RR42_RS17640	0.35	+0.3
3,817,373	+		RR42_RS17640	0.35	+0.1
3,817,373	+		RR42_RS17640	0.35	-0.1
3,817,373	+		RR42_RS17640	0.35	+0.9
3,817,374	-		RR42_RS17640	0.35	+0.8
3,817,374	-		RR42_RS17640	0.35	+0.4
3,817,374	-		RR42_RS17640	0.35	+0.2
3,817,439	-		RR42_RS17640	0.45	-0.4
3,817,439	-		RR42_RS17640	0.45	+0.5
3,817,508	+		RR42_RS17640	0.55	+0.1
3,817,508	+		RR42_RS17640	0.55	-0.3
3,817,508	+		RR42_RS17640	0.55	-0.7
3,817,508	+		RR42_RS17640	0.55	-1.3
3,817,509	-		RR42_RS17640	0.55	+0.4
3,817,628	+		RR42_RS17640	0.72	-1.0
3,817,628	+		RR42_RS17640	0.72	-0.1
3,817,629	-		RR42_RS17640	0.72	+0.7
3,817,629	-		RR42_RS17640	0.72	+0.1
3,817,629	-		RR42_RS17640	0.72	-0.5
3,817,629	-		RR42_RS17640	0.72	-0.7
3,817,636	+		RR42_RS17640	0.73	+1.7
3,817,637	-		RR42_RS17640	0.73	-0.0
3,817,765	+				+0.2
3,817,765	+				+0.2
3,817,765	+				-0.8
3,817,765	+				+0.5
3,817,766	-				-0.5
3,817,810	+				-0.5
3,818,001	+				+0.6
3,818,001	+				-0.5
3,818,001	+				-0.8
3,818,001	+				+0.3
3,818,002	-				+0.4
3,818,084	+		RR42_RS17645	0.19	-0.0
3,818,084	+		RR42_RS17645	0.19	+0.5
3,818,085	-		RR42_RS17645	0.19	-0.2
3,818,085	-		RR42_RS17645	0.19	+0.1