Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16485

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
3,570,279	-		RR42_RS16480	0.68	-0.7
3,570,385	-		RR42_RS16480	0.71	-0.2
3,570,549	+		RR42_RS16480	0.77	-0.2
3,570,550	-		RR42_RS16480	0.77	+0.3
3,570,550	-		RR42_RS16480	0.77	-1.3
3,570,550	-		RR42_RS16480	0.77	-0.2
3,570,550	-		RR42_RS16480	0.77	-0.6
3,570,705	+		RR42_RS16480	0.82	+0.7
3,570,717	+		RR42_RS16480	0.83	+0.2
3,570,718	-		RR42_RS16480	0.83	-0.3
3,570,825	+		RR42_RS16480	0.86	-0.2
3,571,084	-				+0.3
3,571,232	+				+1.4
3,571,293	+				+0.8
3,571,294	-				+0.5
3,571,367	+		RR42_RS16485	0.11	-0.1
3,571,736	+		RR42_RS16485	0.41	+0.9
3,571,737	-		RR42_RS16485	0.41	-1.2
3,571,737	-		RR42_RS16485	0.41	-1.4
3,571,767	-		RR42_RS16485	0.44	-1.4
3,571,811	-		RR42_RS16485	0.47	+0.5
3,572,054	+		RR42_RS16485	0.67	-1.8
3,572,055	-		RR42_RS16485	0.67	+0.7
3,572,057	+		RR42_RS16485	0.67	-0.2
3,572,057	+		RR42_RS16485	0.67	+0.4
3,572,207	+		RR42_RS16485	0.79	-0.4
3,572,208	-		RR42_RS16485	0.80	-0.5
3,572,467	+				-0.4
3,572,467	+				-0.4
3,572,468	-				+0.3
3,572,656	+				+0.4
3,572,657	-				-0.3
3,572,657	-				-0.3
3,572,657	-				-1.1
3,572,657	-				+0.2
3,572,660	+				+1.4
3,572,660	+				+0.5
3,572,661	-				-0.6
3,572,700	-				-0.7
3,572,717	+				-0.2
3,572,766	+				-1.6
3,572,766	+				+1.0
3,572,794	+				-1.0
3,572,795	-				-1.3
3,573,039	+		RR42_RS16490	0.11	+0.3
3,573,040	-		RR42_RS16490	0.11	-0.0
3,573,040	-		RR42_RS16490	0.11	-1.4
3,573,040	-		RR42_RS16490	0.11	+0.0
3,573,045	+		RR42_RS16490	0.12	+1.5
3,573,045	+		RR42_RS16490	0.12	-0.4
3,573,046	-		RR42_RS16490	0.12	+0.4
3,573,285	+		RR42_RS16490	0.38	+1.8
3,573,286	-		RR42_RS16490	0.38	+0.1
3,573,286	-		RR42_RS16490	0.38	+0.2
3,573,286	-		RR42_RS16490	0.38	-0.4
3,573,286	-		RR42_RS16490	0.38	-0.0
3,573,409	-		RR42_RS16490	0.51	-1.6