Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16280

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
3,522,948	+				-1.8
3,522,948	+				+0.1
3,522,948	+				+0.2
3,522,948	+				+0.7
3,522,948	+				-1.0
3,522,949	-				-1.4
3,522,970	+				-0.4
3,523,229	+		RR42_RS16275	0.32	+0.3
3,523,229	+		RR42_RS16275	0.32	+0.5
3,523,408	+		RR42_RS16275	0.55	-1.2
3,523,408	+		RR42_RS16275	0.55	+0.6
3,523,654	+		RR42_RS16275	0.87	+0.0
3,523,723	+				-1.1
3,523,723	+				+0.3
3,523,723	+				-1.4
3,523,724	-				+0.9
3,523,724	-				-0.9
3,523,742	+				-0.4
3,523,742	+				-3.0
3,523,851	-				+1.2
3,523,898	-				+0.1
3,523,909	+				-0.7
3,523,949	+				-3.2
3,523,990	+				+1.0
3,524,171	-		RR42_RS16280	0.27	-0.6
3,524,271	+		RR42_RS16280	0.38	-1.3
3,524,500	+		RR42_RS16280	0.62	-2.1
3,524,500	+		RR42_RS16280	0.62	+1.0
3,524,500	+		RR42_RS16280	0.62	-3.6
3,524,501	-		RR42_RS16280	0.63	-1.1
3,524,501	-		RR42_RS16280	0.63	-1.0
3,524,608	+		RR42_RS16280	0.74	-3.3
3,524,609	-		RR42_RS16280	0.74	-1.2
3,524,609	-		RR42_RS16280	0.74	-1.7
3,524,609	-		RR42_RS16280	0.74	-2.1
3,524,609	-		RR42_RS16280	0.74	-2.4
3,524,609	-		RR42_RS16280	0.74	-1.0
3,524,609	-		RR42_RS16280	0.74	-1.5
3,524,609	-		RR42_RS16280	0.74	-1.4
3,524,609	-		RR42_RS16280	0.74	+0.2
3,524,764	+				-0.6
3,524,766	+				-2.6
3,524,772	+				-1.5
3,524,773	-				-1.5
3,524,810	+				+0.6
3,524,810	+				+0.6
3,524,811	-				-0.6
3,524,843	-				+0.1
3,524,843	-				+0.6
3,524,882	+				-1.0
3,524,882	+				-0.6
3,524,883	-				+0.7
3,524,883	-				-1.5
3,524,992	+				-0.7
3,524,992	+				+0.2
3,524,993	-				-0.9
3,524,993	-				-0.3
3,525,046	+				-0.5
3,525,046	+				-1.1
3,525,047	-				-0.5
3,525,047	-				+0.4
3,525,047	-				-0.7
3,525,465	-		RR42_RS16285	0.36	-0.1
3,525,538	+		RR42_RS16285	0.43	-0.7
3,525,587	+		RR42_RS16285	0.47	+1.5
3,525,588	-		RR42_RS16285	0.47	-0.5
3,525,588	-		RR42_RS16285	0.47	+0.8
3,525,588	-		RR42_RS16285	0.47	+0.1
3,525,617	+		RR42_RS16285	0.49	-0.7
3,525,617	+		RR42_RS16285	0.49	-0.3
3,525,618	-		RR42_RS16285	0.50	-0.6
3,525,618	-		RR42_RS16285	0.50	-0.4