Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14945

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
3,232,203	-		RR42_RS14940	0.77	+0.9
3,232,203	-		RR42_RS14940	0.77	+0.1
3,232,298	+		RR42_RS14940	0.83	+0.4
3,232,298	+		RR42_RS14940	0.83	+1.5
3,232,389	-		RR42_RS14940	0.89	-0.1
3,232,389	-		RR42_RS14940	0.89	-0.5
3,232,549	+				-0.5
3,232,549	+				+0.9
3,232,555	+				+0.7
3,232,570	+				-0.5
3,232,571	-				-0.3
3,232,745	-				-1.7
3,232,887	-				-0.5
3,232,887	-				+0.1
3,232,899	+				-0.3
3,232,967	-				+0.4
3,232,967	-				+0.0
3,233,020	+		RR42_RS14945	0.23	+0.3
3,233,021	-		RR42_RS14945	0.23	-0.2
3,233,113	+		RR42_RS14945	0.51	-1.4
3,233,212	-		RR42_RS14945	0.80	-1.1
3,233,212	-		RR42_RS14945	0.80	-1.9
3,233,298	-				+0.0
3,233,378	+				-0.7
3,233,379	-				-1.8
3,233,396	+		RR42_RS14950	0.13	+0.1
3,233,417	+		RR42_RS14950	0.18	-0.1
3,233,643	+		RR42_RS14950	0.66	-0.4
3,233,643	+		RR42_RS14950	0.66	-0.4
3,233,644	-		RR42_RS14950	0.66	-0.3
3,233,796	+				+0.6
3,233,796	+				-1.4
3,233,796	+				+0.5
3,233,797	-				+0.8
3,233,938	-				-0.6
3,233,980	+				+0.1
3,233,980	+				-0.1
3,233,980	+				-0.1
3,233,980	+				+0.4
3,233,980	+				-0.1
3,233,980	+				+1.5
3,233,981	-				-0.6
3,233,981	-				-0.7
3,233,981	-				-0.1
3,233,981	-				+0.5
3,234,097	+				+0.7
3,234,098	-				+1.5
3,234,098	-				-0.2
3,234,139	-				+0.3
3,234,218	-		RR42_RS14955	0.25	+0.3
3,234,228	+		RR42_RS14955	0.28	+0.5
3,234,229	-		RR42_RS14955	0.28	-0.4
3,234,247	+		RR42_RS14955	0.33	-0.0
3,234,248	-		RR42_RS14955	0.33	-0.7
3,234,248	-		RR42_RS14955	0.33	-0.2
3,234,276	+		RR42_RS14955	0.41	+0.7
3,234,276	+		RR42_RS14955	0.41	-0.6