Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14750

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
3,178,784	+				-0.1
3,178,784	+				-1.4
3,178,964	+				-0.0
3,178,964	+				-1.2
3,178,964	+				+0.1
3,179,136	-		RR42_RS14750	0.13	-0.7
3,179,172	-		RR42_RS14750	0.15	+2.4
3,179,172	-		RR42_RS14750	0.15	+0.6
3,179,172	-		RR42_RS14750	0.15	-1.5
3,179,172	-		RR42_RS14750	0.15	-0.1
3,179,172	-		RR42_RS14750	0.15	+1.4
3,179,336	+		RR42_RS14750	0.27	-1.4
3,179,336	+		RR42_RS14750	0.27	+0.1
3,179,337	-		RR42_RS14750	0.27	+0.2
3,179,351	+		RR42_RS14750	0.28	+0.4
3,179,351	+		RR42_RS14750	0.28	-0.6
3,179,351	+		RR42_RS14750	0.28	-0.2
3,179,359	+		RR42_RS14750	0.29	-0.1
3,179,360	-		RR42_RS14750	0.29	-0.3
3,179,360	-		RR42_RS14750	0.29	+1.6
3,179,360	-		RR42_RS14750	0.29	-2.0
3,179,467	-		RR42_RS14750	0.37	+0.1
3,179,467	-		RR42_RS14750	0.37	-0.3
3,179,467	-		RR42_RS14750	0.37	+0.0
3,179,467	-		RR42_RS14750	0.37	-0.0
3,179,502	-		RR42_RS14750	0.39	-0.0
3,179,657	+		RR42_RS14750	0.51	+0.2
3,179,787	-		RR42_RS14750	0.60	-0.2
3,179,848	-		RR42_RS14750	0.65	+0.5
3,180,042	-		RR42_RS14750	0.79	+0.1
3,180,042	-		RR42_RS14750	0.79	+0.5
3,180,137	-		RR42_RS14750	0.86	-1.0
3,180,137	-		RR42_RS14750	0.86	+0.4
3,180,295	-				-0.2
3,180,296	+				-0.4
3,180,296	+				-1.4
3,180,296	+				-0.0
3,180,296	+				-0.5
3,180,297	-				-0.1
3,180,297	-				+0.7
3,180,297	-				+0.4
3,180,370	+				+0.4
3,180,370	+				-0.0
3,180,371	-				+0.3
3,180,371	-				-0.1
3,180,378	+				+0.5
3,180,508	-		RR42_RS14755	0.20	-0.4
3,180,655	+		RR42_RS14755	0.44	-1.7
3,180,655	+		RR42_RS14755	0.44	+0.3
3,180,655	+		RR42_RS14755	0.44	-3.1
3,180,655	+		RR42_RS14755	0.44	-0.5
3,180,656	-		RR42_RS14755	0.44	-2.3
3,180,934	-		RR42_RS14755	0.88	-0.6
3,181,123	+				-2.9
3,181,124	-				-2.0
3,181,164	+				-1.1
3,181,165	-				-0.0
3,181,165	-				-0.6
3,181,165	-				-1.9
3,181,214	+		RR42_RS14760	0.16	-1.0
3,181,215	-		RR42_RS14760	0.16	-1.7