Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13215

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
2,846,063	+		RR42_RS13210	0.31	+2.1
2,846,087	+		RR42_RS13210	0.34	+0.6
2,846,088	-		RR42_RS13210	0.34	-0.7
2,846,204	+		RR42_RS13210	0.45	+0.4
2,846,205	-		RR42_RS13210	0.45	+0.8
2,846,205	-		RR42_RS13210	0.45	-0.1
2,846,222	+		RR42_RS13210	0.46	-0.1
2,846,223	-		RR42_RS13210	0.46	-0.9
2,846,223	-		RR42_RS13210	0.46	+0.3
2,846,384	+		RR42_RS13210	0.62	-0.3
2,846,385	-		RR42_RS13210	0.62	+0.5
2,846,429	+		RR42_RS13210	0.66	-1.5
2,846,429	+		RR42_RS13210	0.66	+0.5
2,846,430	-		RR42_RS13210	0.66	+2.0
2,846,430	-		RR42_RS13210	0.66	+0.6
2,846,430	-		RR42_RS13210	0.66	+0.4
2,846,430	-		RR42_RS13210	0.66	-0.1
2,846,430	-		RR42_RS13210	0.66	+1.7
2,846,455	+		RR42_RS13210	0.68	+0.5
2,846,455	+		RR42_RS13210	0.68	+2.0
2,846,468	+		RR42_RS13210	0.69	-0.3
2,846,468	+		RR42_RS13210	0.69	+0.9
2,846,469	-		RR42_RS13210	0.70	+0.7
2,846,682	-		RR42_RS13210	0.90	+1.4
2,846,778	-				+1.2
2,846,867	+				+0.8
2,846,867	+				+0.3
2,846,867	+				+1.0
2,846,867	+				+0.1
2,846,868	-				+0.7
2,846,868	-				-0.6
2,846,868	-				-1.4
2,846,868	-				+0.6
2,846,868	-				+0.8
2,846,975	+				-0.3
2,846,975	+				+1.7
2,846,976	-				-0.9
2,846,976	-				-2.0
2,846,976	-				-0.0
2,846,976	-				-0.2
2,846,976	-				+0.6
2,847,138	+		RR42_RS13215	0.12	+0.7
2,847,138	+		RR42_RS13215	0.12	-0.2
2,847,138	+		RR42_RS13215	0.12	+0.7
2,847,138	+		RR42_RS13215	0.12	+0.4
2,847,138	+		RR42_RS13215	0.12	+0.7
2,847,138	+		RR42_RS13215	0.12	+1.0
2,847,139	-		RR42_RS13215	0.12	+0.4
2,847,139	-		RR42_RS13215	0.12	+0.7
2,847,139	-		RR42_RS13215	0.12	+1.7
2,847,139	-		RR42_RS13215	0.12	-2.2
2,847,139	-		RR42_RS13215	0.12	+0.1
2,847,344	-		RR42_RS13215	0.42	+1.1
2,847,398	+		RR42_RS13215	0.49	-0.3
2,847,452	-		RR42_RS13215	0.57	+1.3
2,847,452	-		RR42_RS13215	0.57	+0.7
2,847,628	+		RR42_RS13215	0.82	-0.5
2,847,628	+		RR42_RS13215	0.82	-0.2
2,847,629	-		RR42_RS13215	0.83	-1.0
2,847,698	-				-0.1
2,847,834	+				-0.7
2,847,834	+				-0.9
2,847,834	+				-0.1
2,847,835	-				+0.2
2,847,835	-				+1.5
2,847,835	-				+1.1
2,847,835	-				+1.0
2,847,835	-				-0.7
2,847,952	-		RR42_RS13220	0.15	+1.1
2,847,952	-		RR42_RS13220	0.15	+1.2
2,847,996	+		RR42_RS13220	0.18	+1.0
2,847,996	+		RR42_RS13220	0.18	-0.0
2,847,996	+		RR42_RS13220	0.18	+0.5
2,847,997	-		RR42_RS13220	0.18	-0.4
2,847,997	-		RR42_RS13220	0.18	+0.1
2,847,999	+		RR42_RS13220	0.18	+0.5
2,847,999	+		RR42_RS13220	0.18	+0.7
2,847,999	+		RR42_RS13220	0.18	-0.1
2,847,999	+		RR42_RS13220	0.18	+0.1
2,848,000	-		RR42_RS13220	0.18	-0.4
2,848,000	-		RR42_RS13220	0.18	+0.8
2,848,000	-		RR42_RS13220	0.18	+0.2
2,848,038	+		RR42_RS13220	0.21	-0.2
2,848,080	+		RR42_RS13220	0.24	+0.7
2,848,080	+		RR42_RS13220	0.24	+0.2
2,848,096	-		RR42_RS13220	0.25	+1.0
2,848,437	+		RR42_RS13220	0.50	-0.3
2,848,437	+		RR42_RS13220	0.50	+1.1
2,848,437	+		RR42_RS13220	0.50	-0.1
2,848,438	-		RR42_RS13220	0.50	-0.5
2,848,586	-		RR42_RS13220	0.61	+1.1
2,848,700	-		RR42_RS13220	0.69	+0.0
2,848,700	-		RR42_RS13220	0.69	+1.7
2,848,703	+		RR42_RS13220	0.70	+0.5
2,848,703	+		RR42_RS13220	0.70	+2.0
2,848,703	+		RR42_RS13220	0.70	+0.4
2,848,704	-		RR42_RS13220	0.70	+0.4
2,848,704	-		RR42_RS13220	0.70	+0.3
2,848,704	-		RR42_RS13220	0.70	-0.6