Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11630

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
2,489,796	+		RR42_RS11625	0.39	+0.4
2,489,796	+		RR42_RS11625	0.39	+0.4
2,489,797	-		RR42_RS11625	0.39	-0.4
2,489,797	-		RR42_RS11625	0.39	-0.3
2,489,837	+		RR42_RS11625	0.42	+1.0
2,489,837	+		RR42_RS11625	0.42	-0.0
2,489,838	-		RR42_RS11625	0.43	+0.1
2,489,838	-		RR42_RS11625	0.43	-0.4
2,489,856	-		RR42_RS11625	0.44	-0.0
2,490,031	-		RR42_RS11625	0.57	+0.5
2,490,031	-		RR42_RS11625	0.57	-0.3
2,490,074	+		RR42_RS11625	0.60	-0.5
2,490,074	+		RR42_RS11625	0.60	+0.1
2,490,075	-		RR42_RS11625	0.60	-0.3
2,490,076	-		RR42_RS11625	0.60	-0.8
2,490,270	+		RR42_RS11625	0.75	+0.8
2,490,271	-		RR42_RS11625	0.75	+0.8
2,490,271	-		RR42_RS11625	0.75	-0.1
2,490,370	-		RR42_RS11625	0.82	-0.1
2,490,540	+				+0.2
2,490,540	+				+0.4
2,490,541	-				-1.7
2,490,561	-				-0.1
2,490,658	+				-0.1
2,490,659	-				-0.9
2,490,680	+				+0.3
2,490,681	-				-1.2
2,490,681	-				+0.7
2,490,718	+				-1.3
2,490,740	+				+1.2
2,490,790	+				+0.2
2,490,791	-				-0.9
2,490,791	-				-0.0
2,490,887	-				+0.3
2,491,102	+		RR42_RS11630	0.14	-0.0
2,491,139	+		RR42_RS11630	0.15	-0.2
2,491,139	+		RR42_RS11630	0.15	-0.9
2,491,139	+		RR42_RS11630	0.15	-1.4
2,491,140	-		RR42_RS11630	0.15	-0.4
2,491,140	-		RR42_RS11630	0.15	+1.7
2,491,141	+		RR42_RS11630	0.15	+1.4
2,491,142	-		RR42_RS11630	0.15	-0.2
2,491,305	+		RR42_RS11630	0.22	-0.8
2,491,316	+		RR42_RS11630	0.22	-0.1
2,491,316	+		RR42_RS11630	0.22	+0.3
2,491,316	+		RR42_RS11630	0.22	-1.2
2,491,317	-		RR42_RS11630	0.22	+0.6
2,491,351	+		RR42_RS11630	0.23	-0.5
2,491,352	-		RR42_RS11630	0.23	-1.3
2,491,352	-		RR42_RS11630	0.23	-0.0
2,491,377	-		RR42_RS11630	0.24	-0.3
2,491,672	-		RR42_RS11630	0.36	+0.7
2,491,708	-		RR42_RS11630	0.37	+0.3
2,491,708	-		RR42_RS11630	0.37	+0.1
2,491,743	+		RR42_RS11630	0.39	-0.2
2,491,744	-		RR42_RS11630	0.39	+0.6
2,491,823	+		RR42_RS11630	0.42	-0.7
2,491,825	+		RR42_RS11630	0.42	+0.4
2,491,826	-		RR42_RS11630	0.42	+0.1
2,491,826	-		RR42_RS11630	0.42	+0.0
2,491,865	-		RR42_RS11630	0.43	+0.4
2,491,900	+		RR42_RS11630	0.45	+0.6
2,492,026	+		RR42_RS11630	0.50	+0.3
2,492,026	+		RR42_RS11630	0.50	-0.2
2,492,026	+		RR42_RS11630	0.50	+0.2
2,492,026	+		RR42_RS11630	0.50	+1.8
2,492,026	+		RR42_RS11630	0.50	+0.1
2,492,027	-		RR42_RS11630	0.50	-0.3
2,492,224	+		RR42_RS11630	0.57	-0.5
2,492,224	+		RR42_RS11630	0.57	+0.1
2,492,937	+		RR42_RS11630	0.85	+0.3
2,492,978	+		RR42_RS11630	0.86	-1.7
2,492,979	-		RR42_RS11630	0.86	+1.0
2,493,088	+				+0.5
2,493,371	+				+0.2
2,493,371	+				-0.5
2,494,087	+		RR42_RS11635	0.89	+1.2
2,494,087	+		RR42_RS11635	0.89	+0.1
2,494,087	+		RR42_RS11635	0.89	+1.3
2,494,087	+		RR42_RS11635	0.89	+0.3
2,494,087	+		RR42_RS11635	0.89	-0.1
2,494,088	-		RR42_RS11635	0.90	-1.1
2,494,242	+				-0.8
2,494,242	+				+0.3
2,494,243	-				-0.3
2,494,325	+				-0.6
2,494,325	+				+0.2