Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11270

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
2,409,298	+				+0.2
2,409,298	+				+0.1
2,409,298	+				+0.2
2,409,299	-				-0.4
2,409,299	-				-0.9
2,409,351	+				+1.2
2,409,501	+				-1.2
2,409,502	-				-0.3
2,409,502	-				-1.2
2,409,502	-				+1.0
2,410,326	+				+2.6
2,410,327	-		RR42_RS11270	0.35	+1.1
2,410,350	+		RR42_RS11270	0.36	+0.1
2,410,350	+		RR42_RS11270	0.36	+0.5
2,410,350	+		RR42_RS11270	0.36	+0.8
2,410,351	-		RR42_RS11270	0.36	+0.4
2,410,351	-		RR42_RS11270	0.36	+0.3
2,410,818	+		RR42_RS11270	0.54	+0.7
2,410,818	+		RR42_RS11270	0.54	+0.1
2,410,818	+		RR42_RS11270	0.54	+1.4
2,410,819	-		RR42_RS11270	0.54	-0.0
2,410,897	-		RR42_RS11270	0.57	+1.5
2,410,995	+		RR42_RS11270	0.61	-1.2
2,411,155	-		RR42_RS11270	0.67	+0.6
2,411,208	+		RR42_RS11270	0.69	+1.2
2,411,233	-		RR42_RS11270	0.70	-0.1
2,411,233	-		RR42_RS11270	0.70	+0.7
2,411,383	-		RR42_RS11270	0.76	+0.9
2,411,589	+		RR42_RS11270	0.84	+1.5
2,411,589	+		RR42_RS11270	0.84	+0.9
2,411,589	+		RR42_RS11270	0.84	+0.1
2,411,589	+		RR42_RS11270	0.84	+0.5
2,411,589	+		RR42_RS11270	0.84	+0.0
2,411,589	+		RR42_RS11270	0.84	+0.5
2,411,590	-		RR42_RS11270	0.84	+1.5
2,411,590	-		RR42_RS11270	0.84	-0.4
2,411,590	-		RR42_RS11270	0.84	+0.3
2,411,817	+				-0.1
2,411,940	+				-0.2
2,411,941	-				+0.2
2,411,941	-				+0.1
2,411,941	-				+0.7
2,412,006	+				-0.5
2,412,049	-				+0.1
2,412,058	+				-0.1
2,412,059	-				+0.0
2,412,125	+				+0.5
2,412,125	+				-1.6
2,412,125	+				+0.6
2,412,125	+				+0.7
2,412,126	-				+0.2
2,412,126	-				+0.6
2,412,126	-				+0.5
2,412,126	-				+0.4
2,412,126	-				-1.3
2,412,126	-				+0.3
2,412,249	-		RR42_RS11275	0.13	-3.0
2,412,534	+		RR42_RS11275	0.37	+0.6
2,412,534	+		RR42_RS11275	0.37	-0.3
2,412,535	-		RR42_RS11275	0.37	-0.1
2,412,535	-		RR42_RS11275	0.37	+1.5
2,412,886	+		RR42_RS11275	0.67	+0.3
2,412,887	-		RR42_RS11275	0.67	+1.3
2,412,887	-		RR42_RS11275	0.67	+1.6
2,412,950	+		RR42_RS11275	0.72	+0.8
2,412,951	-		RR42_RS11275	0.72	-0.5
2,412,951	-		RR42_RS11275	0.72	+0.6
2,412,951	-		RR42_RS11275	0.72	-0.1