Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08445

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
1,780,395	+		RR42_RS08435	0.27	-1.1
1,780,395	+		RR42_RS08435	0.27	-0.4
1,780,396	-		RR42_RS08435	0.27	+1.6
1,780,417	-		RR42_RS08435	0.31	-0.3
1,780,480	-		RR42_RS08435	0.44	+0.3
1,780,609	+		RR42_RS08435	0.71	-0.8
1,780,637	-		RR42_RS08435	0.77	-0.5
1,780,967	-		RR42_RS08440	0.34	+0.6
1,781,068	+		RR42_RS08440	0.50	+1.6
1,781,068	+		RR42_RS08440	0.50	+1.0
1,781,069	-		RR42_RS08440	0.50	+0.2
1,781,069	-		RR42_RS08440	0.50	-0.5
1,781,069	-		RR42_RS08440	0.50	+0.9
1,781,081	-		RR42_RS08440	0.52	+0.4
1,781,312	-		RR42_RS08440	0.88	+0.0
1,781,374	+				+0.3
1,781,374	+				-1.0
1,781,375	-				+0.2
1,781,375	-				-0.7
1,781,375	-				-1.4
1,781,375	-				-0.2
1,781,378	+				-0.3
1,781,378	+				-0.2
1,781,379	-				+0.2
1,781,379	-				-0.3
1,781,455	-		RR42_RS08445	0.18	-0.2
1,781,699	+		RR42_RS08445	0.76	-0.1
1,781,699	+		RR42_RS08445	0.76	+0.3
1,781,700	-		RR42_RS08445	0.76	-1.4
1,781,726	+		RR42_RS08445	0.83	-0.4
1,781,727	-		RR42_RS08445	0.83	+0.2
1,781,727	-		RR42_RS08445	0.83	-0.3
1,781,771	-				-0.8
1,781,914	+		RR42_RS08450	0.35	-1.0
1,781,914	+		RR42_RS08450	0.35	-0.2
1,782,070	+				-0.4
1,782,070	+				-0.3
1,782,070	+				+0.4
1,782,071	-				+0.7
1,782,108	+				+0.4
1,782,108	+				-0.2
1,782,201	+		RR42_RS08455	0.35	-1.9
1,782,201	+		RR42_RS08455	0.35	-0.3
1,782,400	+				+0.4
1,782,401	-				-0.3
1,782,401	-				-0.5
1,782,401	-				+0.4
1,782,401	-				-0.5
1,782,401	-				-0.8
1,782,402	+				-0.1
1,782,403	-				+0.6
1,782,403	-				-0.5
1,782,403	-				-0.5
1,782,404	+				+0.8
1,782,404	+				-0.1
1,782,404	+				+0.6
1,782,404	+				+0.2
1,782,404	+				+0.1
1,782,404	+				+0.3
1,782,404	+				-0.2
1,782,404	+				-0.3
1,782,404	+				-1.1
1,782,404	+				-1.0
1,782,404	+				-0.0
1,782,405	-				+0.3
1,782,405	-				-0.2
1,782,405	-				+0.8
1,782,405	-				+0.2
1,782,405	-				-0.3
1,782,405	-				-0.5
1,782,405	-				-0.8
1,782,405	-				-0.4
1,782,405	-				-0.8
1,782,405	-				-0.2
1,782,405	-				+1.4
1,782,408	+				+0.2
1,782,408	+				-0.8
1,782,408	+				+0.7
1,782,408	+				-1.0
1,782,409	-				+0.1
1,782,409	-				+0.1
1,782,457	+				-0.3
1,782,484	+				-0.3
1,782,484	+				+0.7
1,782,485	-				+0.8
1,782,499	+				-0.4
1,782,499	+				-0.3
1,782,499	+				+0.0
1,782,500	-				+0.1
1,782,500	-				+0.4
1,782,581	+				-0.5
1,782,582	-				-0.2
1,782,582	-				+0.0
1,782,583	+				-0.2
1,782,584	-				+0.7
1,782,584	-				-0.0
1,782,584	-				+0.3
1,782,672	+				-0.4