Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07460

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
1,593,846	+		RR42_RS07455	0.33	-1.3
1,593,846	+		RR42_RS07455	0.33	+0.2
1,593,846	+		RR42_RS07455	0.33	+1.1
1,593,944	+		RR42_RS07455	0.43	+0.6
1,593,945	-		RR42_RS07455	0.43	-0.7
1,593,945	-		RR42_RS07455	0.43	-1.3
1,593,999	+		RR42_RS07455	0.49	-0.8
1,593,999	+		RR42_RS07455	0.49	-2.4
1,593,999	+		RR42_RS07455	0.49	-1.4
1,593,999	+		RR42_RS07455	0.49	-2.9
1,594,297	-		RR42_RS07455	0.79	-1.1
1,594,422	-				-0.5
1,594,434	+				-2.0
1,594,435	-				+3.4
1,594,505	+				-1.4
1,594,506	-				-0.6
1,594,613	-				-0.3
1,594,613	-				+0.3
1,594,623	+				-1.1
1,594,655	+				-0.9
1,594,655	+				-1.7
1,594,655	+				-0.7
1,594,655	+				-0.3
1,594,656	-				-1.0
1,594,664	+				+0.1
1,594,675	+				-2.6
1,594,676	-				-0.4
1,594,676	-				+0.3
1,594,824	-				+0.3
1,594,973	+		RR42_RS07460	0.14	-0.5
1,594,973	+		RR42_RS07460	0.14	-2.7
1,595,033	+		RR42_RS07460	0.20	-0.0
1,595,034	-		RR42_RS07460	0.20	+1.7
1,595,069	+		RR42_RS07460	0.23	-1.1
1,595,156	+		RR42_RS07460	0.32	+0.6
1,595,192	+		RR42_RS07460	0.35	+0.6
1,595,192	+		RR42_RS07460	0.35	+0.8
1,595,194	+		RR42_RS07460	0.35	-2.2
1,595,195	-		RR42_RS07460	0.35	-2.3
1,595,268	-		RR42_RS07460	0.42	+0.2
1,595,268	-		RR42_RS07460	0.42	-0.1
1,595,268	-		RR42_RS07460	0.42	+1.4
1,595,504	+		RR42_RS07460	0.64	-0.7
1,595,516	+		RR42_RS07460	0.66	-0.1
1,595,696	+		RR42_RS07460	0.83	-0.1
1,595,697	-		RR42_RS07460	0.83	-1.0
1,595,724	-		RR42_RS07460	0.85	-0.3
1,595,768	+		RR42_RS07460	0.89	+0.2
1,595,884	+				-0.2
1,595,884	+				+0.6
1,595,885	-				+0.7
1,595,885	-				+0.1
1,595,907	-				+0.8
1,595,907	-				-0.2
1,595,907	-				+0.0