Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07315

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
1,558,310	+				+1.2
1,558,319	+				-0.1
1,558,678	+				-0.8
1,558,678	+				+0.3
1,558,704	+				+3.6
1,558,704	+				+0.1
1,558,704	+				+1.6
1,558,704	+				+0.1
1,558,705	-				+0.2
1,558,705	-				+0.0
1,558,720	+				+0.3
1,558,789	+				+0.9
1,558,790	-				+0.2
1,558,790	-				+0.3
1,558,823	+				+0.5
1,558,823	+				+0.1
1,558,823	+				+0.2
1,558,823	+				-1.0
1,558,823	+				-0.0
1,558,824	-				+0.6
1,558,832	+				+0.3
1,558,833	-				+0.5
1,558,833	-				+0.0
1,558,866	-				+1.8
1,558,891	-		RR42_RS07310	0.12	+0.2
1,558,915	+		RR42_RS07310	0.21	+0.0
1,558,915	+		RR42_RS07310	0.21	+0.5
1,558,915	+		RR42_RS07310	0.21	+0.6
1,558,916	-		RR42_RS07310	0.21	-1.8
1,559,092	+		RR42_RS07310	0.88	+0.1
1,559,092	+		RR42_RS07310	0.88	+0.5
1,559,093	-		RR42_RS07310	0.88	+1.3
1,559,316	-				+0.1
1,559,488	+		RR42_RS07315	0.11	+0.8
1,559,513	+		RR42_RS07315	0.12	+0.6
1,559,513	+		RR42_RS07315	0.12	+0.4
1,559,514	-		RR42_RS07315	0.12	-0.7
1,559,667	-		RR42_RS07315	0.21	+0.1
1,559,667	-		RR42_RS07315	0.21	+0.7
1,559,684	+		RR42_RS07315	0.22	-0.5
1,559,685	-		RR42_RS07315	0.22	-1.5
1,559,685	-		RR42_RS07315	0.22	+0.6
1,559,825	+		RR42_RS07315	0.30	+1.2
1,559,825	+		RR42_RS07315	0.30	+1.8
1,559,829	+		RR42_RS07315	0.30	+0.4
1,559,831	+		RR42_RS07315	0.30	+0.7
1,559,831	+		RR42_RS07315	0.30	-0.4
1,559,831	+		RR42_RS07315	0.30	+0.3
1,559,832	-		RR42_RS07315	0.30	+0.1
1,559,832	-		RR42_RS07315	0.30	+0.9
1,560,061	+		RR42_RS07315	0.43	+0.2
1,560,113	+		RR42_RS07315	0.46	+0.7
1,560,113	+		RR42_RS07315	0.46	+2.1
1,560,114	-		RR42_RS07315	0.46	+0.6
1,560,117	+		RR42_RS07315	0.46	+0.6
1,560,118	-		RR42_RS07315	0.46	+0.2
1,560,118	-		RR42_RS07315	0.46	-0.0
1,560,151	-		RR42_RS07315	0.48	+0.9
1,560,151	-		RR42_RS07315	0.48	+0.5
1,560,152	+		RR42_RS07315	0.48	+0.3
1,560,152	+		RR42_RS07315	0.48	+0.1
1,560,153	-		RR42_RS07315	0.48	+0.5
1,560,153	-		RR42_RS07315	0.48	+0.2
1,560,153	-		RR42_RS07315	0.48	-0.2
1,560,333	+		RR42_RS07315	0.58	-0.1
1,560,384	+		RR42_RS07315	0.61	+0.8
1,560,385	-		RR42_RS07315	0.61	+0.2
1,560,516	+		RR42_RS07315	0.69	-0.4
1,560,597	+		RR42_RS07315	0.73	+0.7
1,560,638	+		RR42_RS07315	0.75	+0.5
1,560,639	-		RR42_RS07315	0.75	+0.1
1,560,785	+		RR42_RS07315	0.84	+0.6
1,560,785	+		RR42_RS07315	0.84	+0.2
1,560,786	-		RR42_RS07315	0.84	+0.7
1,560,920	+				-0.3
1,560,921	-				+2.1
1,561,820	+		RR42_RS07325	0.21	-0.1
1,561,821	-		RR42_RS07325	0.21	+0.2
1,561,865	+		RR42_RS07325	0.26	+0.2
1,562,072	+		RR42_RS07325	0.52	-2.6
1,562,073	-		RR42_RS07325	0.53	-0.2
1,562,073	-		RR42_RS07325	0.53	+0.1