Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04930

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
1,092,331	+				-1.1
1,092,331	+				+0.3
1,092,332	-				-0.9
1,092,332	-				-0.7
1,092,557	+		RR42_RS04925	0.11	+2.2
1,092,600	-		RR42_RS04925	0.19	+1.3
1,092,727	+		RR42_RS04925	0.40	+0.3
1,092,727	+		RR42_RS04925	0.40	-0.2
1,092,728	-		RR42_RS04925	0.40	-0.3
1,092,728	-		RR42_RS04925	0.40	+0.0
1,092,859	+		RR42_RS04925	0.62	-0.1
1,092,860	-		RR42_RS04925	0.62	-0.3
1,092,865	+		RR42_RS04925	0.63	+0.4
1,092,866	-		RR42_RS04925	0.63	+0.9
1,092,976	+		RR42_RS04925	0.82	+0.4
1,092,976	+		RR42_RS04925	0.82	-0.1
1,092,994	+		RR42_RS04925	0.85	-0.5
1,092,994	+		RR42_RS04925	0.85	+0.4
1,092,994	+		RR42_RS04925	0.85	+1.4
1,092,995	-		RR42_RS04925	0.85	-0.3
1,092,995	-		RR42_RS04925	0.85	+0.4
1,093,114	+				-0.7
1,093,115	-				-0.4
1,093,116	+				+0.0
1,093,116	+				+0.3
1,093,116	+				+0.1
1,093,116	+				-0.4
1,093,116	+				-0.6
1,093,117	-				+0.3
1,093,117	-				-0.0
1,093,117	-				-1.3
1,093,117	-				-0.1
1,093,193	-				-1.1
1,093,193	-				-0.6
1,093,373	-				-0.7
1,093,449	-				+0.9
1,093,455	+				+0.3
1,093,456	-				+1.4
1,093,456	-				-1.1
1,093,759	-		RR42_RS04935	0.23	+0.7
1,093,877	+		RR42_RS04935	0.37	-0.1
1,093,877	+		RR42_RS04935	0.37	+0.7
1,093,877	+		RR42_RS04935	0.37	+0.7
1,093,878	-		RR42_RS04935	0.37	-0.5
1,093,878	-		RR42_RS04935	0.37	+0.9
1,093,878	-		RR42_RS04935	0.37	-0.0
1,093,884	-		RR42_RS04935	0.38	-0.8
1,093,945	-		RR42_RS04935	0.45	-0.7
1,094,175	+		RR42_RS04935	0.72	+0.2
1,094,176	-		RR42_RS04935	0.72	+2.9
1,094,176	-		RR42_RS04935	0.72	-1.6