Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1013

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
1,147,866	+		Pf1N1B4_1012	0.26	+1.1
1,147,890	+		Pf1N1B4_1012	0.28	+0.1
1,147,891	-		Pf1N1B4_1012	0.28	+0.5
1,147,937	+		Pf1N1B4_1012	0.33	-0.9
1,147,937	+		Pf1N1B4_1012	0.33	+0.1
1,147,937	+		Pf1N1B4_1012	0.33	-2.2
1,147,938	-		Pf1N1B4_1012	0.33	+1.7
1,147,938	-		Pf1N1B4_1012	0.33	+0.1
1,147,938	-		Pf1N1B4_1012	0.33	-0.4
1,147,956	-		Pf1N1B4_1012	0.35	-1.9
1,147,961	+		Pf1N1B4_1012	0.36	+1.1
1,147,962	-		Pf1N1B4_1012	0.36	+0.2
1,148,071	+				+1.7
1,148,072	-		Pf1N1B4_1012	0.47	-1.2
1,148,072	-		Pf1N1B4_1012	0.47	-0.6
1,148,072	-				+0.1
1,148,423	-		Pf1N1B4_1012	0.84	+0.7
1,148,543	+				-0.9
1,148,543	+				+2.1
1,148,543	+				-1.9
1,148,543	+				-0.5
1,148,543	+				+0.7
1,148,543	+				+0.1
1,148,543	+				-2.2
1,148,543	+				-0.3
1,148,543	+				-0.5
1,148,544	+				-0.9
1,148,544	-				-2.2
1,148,597	+				-0.6
1,148,694	+				-1.2
1,148,697	-				-0.3
1,148,857	+		Pf1N1B4_1013	0.11	+0.1
1,149,019	-		Pf1N1B4_1013	0.23	+0.1
1,149,019	-		Pf1N1B4_1013	0.23	+1.4
1,149,070	+		Pf1N1B4_1013	0.26	-0.5
1,149,070	+		Pf1N1B4_1013	0.26	+0.5
1,149,133	+		Pf1N1B4_1013	0.31	-1.3
1,149,133	+		Pf1N1B4_1013	0.31	-1.9
1,149,133	+		Pf1N1B4_1013	0.31	+0.7
1,149,133	+		Pf1N1B4_1013	0.31	+0.1
1,149,133	+		Pf1N1B4_1013	0.31	+0.1
1,149,133	+		Pf1N1B4_1013	0.31	-0.9
1,149,133	+		Pf1N1B4_1013	0.31	-0.4
1,149,133	+		Pf1N1B4_1013	0.31	-1.9
1,149,133	+		Pf1N1B4_1013	0.31	+0.4
1,149,133	+		Pf1N1B4_1013	0.31	-0.7
1,149,133	+		Pf1N1B4_1013	0.31	-0.4
1,149,133	+		Pf1N1B4_1013	0.31	+0.1
1,149,133	+		Pf1N1B4_1013	0.31	+0.1
1,149,134	-		Pf1N1B4_1013	0.31	-0.9
1,149,134	-		Pf1N1B4_1013	0.31	-0.9
1,149,134	-		Pf1N1B4_1013	0.31	-1.1
1,149,134	-		Pf1N1B4_1013	0.31	-0.2
1,149,134	-		Pf1N1B4_1013	0.31	-0.3
1,149,134	-		Pf1N1B4_1013	0.31	-0.9
1,149,134	-		Pf1N1B4_1013	0.31	-0.3
1,149,136	+		Pf1N1B4_1013	0.31	-1.0
1,149,137	-		Pf1N1B4_1013	0.31	+0.7
1,149,218	-		Pf1N1B4_1013	0.37	-1.1
1,149,345	+		Pf1N1B4_1013	0.46	-0.6
1,149,345	+		Pf1N1B4_1013	0.46	-1.7
1,149,345	+		Pf1N1B4_1013	0.46	-0.9
1,149,345	+		Pf1N1B4_1013	0.46	-1.5
1,149,345	+		Pf1N1B4_1013	0.46	+0.1
1,149,345	+		Pf1N1B4_1013	0.46	-0.0
1,149,345	+		Pf1N1B4_1013	0.46	+0.1
1,149,345	+		Pf1N1B4_1013	0.46	+0.5
1,149,345	+		Pf1N1B4_1013	0.46	-1.2
1,149,345	+		Pf1N1B4_1013	0.46	-1.2
1,149,346	-		Pf1N1B4_1013	0.46	-2.2
1,149,346	-		Pf1N1B4_1013	0.46	-0.5
1,149,346	-		Pf1N1B4_1013	0.46	-0.2
1,149,530	+		Pf1N1B4_1013	0.60	-2.2
1,149,573	+		Pf1N1B4_1013	0.63	-0.2
1,149,573	+		Pf1N1B4_1013	0.63	-1.1
1,149,573	+		Pf1N1B4_1013	0.63	-0.6
1,149,574	-		Pf1N1B4_1013	0.63	-0.4
1,149,613	+		Pf1N1B4_1013	0.66	-0.6
1,149,613	+		Pf1N1B4_1013	0.66	-1.2
1,149,613	+		Pf1N1B4_1013	0.66	+2.1
1,149,613	+		Pf1N1B4_1013	0.66	-1.9
1,149,614	-		Pf1N1B4_1013	0.66	-0.9
1,149,616	+		Pf1N1B4_1013	0.66	-0.7
1,149,616	+		Pf1N1B4_1013	0.66	+1.1
1,149,616	+		Pf1N1B4_1013	0.66	+1.5
1,149,616	+		Pf1N1B4_1013	0.66	-0.9
1,149,616	+		Pf1N1B4_1013	0.66	-0.2
1,149,616	+		Pf1N1B4_1013	0.66	-0.1
1,149,616	+		Pf1N1B4_1013	0.66	+0.1
1,149,616	+		Pf1N1B4_1013	0.66	+1.1
1,149,616	+		Pf1N1B4_1013	0.66	+1.1
1,149,616	+		Pf1N1B4_1013	0.66	+0.3
1,149,616	+		Pf1N1B4_1013	0.66	+0.4
1,149,616	+		Pf1N1B4_1013	0.66	-0.2
1,149,616	+		Pf1N1B4_1013	0.66	+1.7
1,149,617	-		Pf1N1B4_1013	0.66	-0.9
1,149,617	-		Pf1N1B4_1013	0.66	+0.1
1,149,788	+		Pf1N1B4_1013	0.79	-1.5
1,149,788	+		Pf1N1B4_1013	0.79	+0.5
1,149,788	+		Pf1N1B4_1013	0.79	+0.1
1,149,789	-		Pf1N1B4_1013	0.79	-0.1
1,149,972	+				+1.1
1,149,972	+				-0.2
1,149,972	+				+1.1
1,149,972	+				-0.1
1,149,972	+				-0.2
1,149,972	+				-0.7
1,149,973	-				+1.1
1,150,033	+				-0.9
1,150,033	+				+0.4
1,150,033	+				+0.4
1,150,033	+				-1.7
1,150,033	+				-0.1
1,150,033	+				-1.5
1,150,034	-				-0.3
1,150,108	+				+0.4
1,150,108	+				+0.1
1,150,109	-				-1.5
1,150,109	-				-0.3
1,150,109	-				-0.3
1,150,109	-				+0.1
1,150,109	-				-2.9
1,150,109	-				+0.8
1,150,128	+				-2.9
1,150,128	+				-1.2
1,150,128	+				+0.1
1,150,128	+				-1.9
1,150,129	-				-0.5
1,150,129	-				+0.1
1,150,132	-				-3.2
1,150,157	+				+0.9
1,150,157	+				-0.6
1,150,157	+				-1.5
1,150,157	+				+0.1
1,150,157	+				+1.3
1,150,157	+				+0.4
1,150,157	+				+0.1
1,150,157	+				-0.9
1,150,157	+				-1.5
1,150,157	+				-1.5
1,150,157	+				+0.4
1,150,157	+				-0.8
1,150,157	+				+0.1
1,150,157	+				-2.5
1,150,157	+				+0.4
1,150,157	+				-0.3
1,150,157	+				-0.9
1,150,158	-				-0.9
1,150,158	-				+0.5
1,150,158	-				-1.5
1,150,158	-				-1.5
1,150,158	-				-0.5
1,150,158	-				+1.7
1,150,158	-				-1.5
1,150,158	-				-1.2
1,150,158	-				-0.7
1,150,158	-				-0.9
1,150,158	-				-0.2
1,150,158	-				+0.6
1,150,158	-				-0.7
1,150,158	-				+0.7
1,150,158	-				-1.9
1,150,158	-				-0.5
1,150,158	-				+0.7
1,150,161	+				-1.2
1,150,161	+				-0.9
1,150,161	+				+0.1
1,150,161	+				+0.1
1,150,161	+				+0.1
1,150,162	-				-0.7
1,150,162	-				-0.3
1,150,162	-				-0.1
1,150,162	-				+0.9
1,150,162	-				+0.1
1,150,162	-				+0.7
1,150,162	-				-0.6
1,150,162	-				+0.7
1,150,162	-				+0.4
1,150,162	-				-0.5
1,150,187	+				+2.7
1,150,187	+				+0.1
1,150,187	+				-0.5
1,150,187	+				-0.8
1,150,188	-				-0.5
1,150,201	-				+0.3
1,150,201	-				-1.2
1,150,201	-				-0.9
1,150,201	-				-0.9
1,150,201	-				+0.3
1,150,201	-				-0.5
1,150,201	-				-0.3
1,150,211	+				-1.6
1,150,212	-				+1.8
1,150,261	+				-0.9
1,150,262	-				-0.6
1,150,262	-				-0.9
1,150,480	+		Pf1N1B4_1014	0.26	+1.4
1,150,480	+		Pf1N1B4_1014	0.26	-1.5
1,150,480	+		Pf1N1B4_1014	0.26	+0.4
1,150,481	-		Pf1N1B4_1014	0.26	-0.3
1,150,481	-		Pf1N1B4_1014	0.26	-0.5
1,150,513	+		Pf1N1B4_1014	0.28	-1.5
1,150,513	+		Pf1N1B4_1014	0.28	-0.2
1,150,513	+		Pf1N1B4_1014	0.28	+0.9
1,150,513	+		Pf1N1B4_1014	0.28	-1.1
1,150,514	-		Pf1N1B4_1014	0.28	+2.1
1,150,514	-		Pf1N1B4_1014	0.28	-1.2
1,151,029	+		Pf1N1B4_1014	0.68	-1.9
1,151,065	+		Pf1N1B4_1014	0.71	-0.2
1,151,066	-		Pf1N1B4_1014	0.71	-1.2
1,151,066	-		Pf1N1B4_1014	0.71	+1.9