Experiment: 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05136 and H281DRAFT_05137 are separated by 10 nucleotides H281DRAFT_05137 and H281DRAFT_05138 are separated by 28 nucleotides
H281DRAFT_05136: H281DRAFT_05136 - response regulator receiver sensor signal transduction histidine kinase (EC 2.7.13.3), at 88,710 to 89,870
_05136
H281DRAFT_05137: H281DRAFT_05137 - Signal transduction histidine kinase, at 89,881 to 92,589
_05137
H281DRAFT_05138: H281DRAFT_05138 - Predicted amino acid dehydrogenase, at 92,618 to 93,832
_05138
Position (kb) 89
90
91
92
93 Strain fitness (log2 ratio) -1
0
1 at 89.095 kb on - strand at 89.233 kb on - strand, within H281DRAFT_05136 at 89.233 kb on - strand, within H281DRAFT_05136 at 89.233 kb on - strand, within H281DRAFT_05136 at 89.270 kb on + strand, within H281DRAFT_05136 at 89.296 kb on - strand, within H281DRAFT_05136 at 89.489 kb on + strand, within H281DRAFT_05136 at 89.883 kb on - strand at 89.929 kb on - strand at 89.958 kb on + strand at 89.958 kb on + strand at 90.113 kb on + strand at 90.113 kb on + strand at 90.114 kb on - strand at 90.527 kb on + strand, within H281DRAFT_05137 at 90.527 kb on + strand, within H281DRAFT_05137 at 90.528 kb on - strand, within H281DRAFT_05137 at 90.528 kb on - strand, within H281DRAFT_05137 at 90.528 kb on - strand, within H281DRAFT_05137 at 90.528 kb on - strand, within H281DRAFT_05137 at 90.810 kb on - strand, within H281DRAFT_05137 at 90.834 kb on - strand, within H281DRAFT_05137 at 91.031 kb on + strand, within H281DRAFT_05137 at 91.508 kb on - strand, within H281DRAFT_05137 at 91.769 kb on + strand, within H281DRAFT_05137 at 91.769 kb on + strand, within H281DRAFT_05137 at 92.358 kb on - strand at 92.474 kb on + strand at 92.475 kb on - strand at 92.475 kb on - strand at 92.584 kb on + strand at 92.585 kb on - strand at 92.609 kb on - strand at 92.627 kb on - strand at 92.812 kb on + strand, within H281DRAFT_05138 at 92.812 kb on + strand, within H281DRAFT_05138 at 92.813 kb on - strand, within H281DRAFT_05138 at 92.814 kb on + strand, within H281DRAFT_05138 at 92.815 kb on - strand, within H281DRAFT_05138 at 92.815 kb on - strand, within H281DRAFT_05138 at 92.890 kb on + strand, within H281DRAFT_05138 at 92.890 kb on + strand, within H281DRAFT_05138 at 92.890 kb on + strand, within H281DRAFT_05138 at 92.891 kb on - strand, within H281DRAFT_05138 at 92.891 kb on - strand, within H281DRAFT_05138 at 92.892 kb on + strand, within H281DRAFT_05138 at 92.892 kb on + strand, within H281DRAFT_05138 at 92.893 kb on - strand, within H281DRAFT_05138 at 92.893 kb on - strand, within H281DRAFT_05138 at 92.894 kb on + strand, within H281DRAFT_05138 at 92.895 kb on - strand at 92.895 kb on - strand, within H281DRAFT_05138 at 92.899 kb on + strand, within H281DRAFT_05138 at 92.899 kb on + strand, within H281DRAFT_05138 at 92.899 kb on + strand, within H281DRAFT_05138 at 92.899 kb on + strand at 93.067 kb on + strand, within H281DRAFT_05138 at 93.068 kb on - strand, within H281DRAFT_05138 at 93.068 kb on - strand, within H281DRAFT_05138 at 93.068 kb on - strand, within H281DRAFT_05138 at 93.190 kb on - strand, within H281DRAFT_05138 at 93.190 kb on - strand, within H281DRAFT_05138 at 93.375 kb on + strand, within H281DRAFT_05138 at 93.375 kb on + strand, within H281DRAFT_05138 at 93.376 kb on - strand, within H281DRAFT_05138 at 93.376 kb on - strand, within H281DRAFT_05138 at 93.387 kb on + strand, within H281DRAFT_05138 at 93.388 kb on - strand, within H281DRAFT_05138
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) remove 89,095 - -0.6 89,233 - H281DRAFT_05136 0.45 +1.1 89,233 - H281DRAFT_05136 0.45 +0.7 89,233 - H281DRAFT_05136 0.45 +0.6 89,270 + H281DRAFT_05136 0.48 +1.1 89,296 - H281DRAFT_05136 0.50 +1.1 89,489 + H281DRAFT_05136 0.67 -0.6 89,883 - +0.2 89,929 - +0.0 89,958 + -0.4 89,958 + +0.3 90,113 + +0.1 90,113 + +1.2 90,114 - -1.1 90,527 + H281DRAFT_05137 0.24 +0.5 90,527 + H281DRAFT_05137 0.24 +0.5 90,528 - H281DRAFT_05137 0.24 +0.0 90,528 - H281DRAFT_05137 0.24 -1.0 90,528 - H281DRAFT_05137 0.24 +0.1 90,528 - H281DRAFT_05137 0.24 +1.1 90,810 - H281DRAFT_05137 0.34 -0.1 90,834 - H281DRAFT_05137 0.35 +1.5 91,031 + H281DRAFT_05137 0.42 +0.5 91,508 - H281DRAFT_05137 0.60 +0.4 91,769 + H281DRAFT_05137 0.70 -0.1 91,769 + H281DRAFT_05137 0.70 -0.4 92,358 - -0.1 92,474 + -0.4 92,475 - +0.3 92,475 - -0.8 92,584 + -0.1 92,585 - +0.7 92,609 - +0.2 92,627 - -0.3 92,812 + H281DRAFT_05138 0.16 -0.2 92,812 + H281DRAFT_05138 0.16 +0.1 92,813 - H281DRAFT_05138 0.16 +0.2 92,814 + H281DRAFT_05138 0.16 +0.1 92,815 - H281DRAFT_05138 0.16 -0.2 92,815 - H281DRAFT_05138 0.16 -0.2 92,890 + H281DRAFT_05138 0.22 +0.3 92,890 + H281DRAFT_05138 0.22 -0.1 92,890 + H281DRAFT_05138 0.22 +0.5 92,891 - H281DRAFT_05138 0.22 -1.3 92,891 - H281DRAFT_05138 0.22 +0.1 92,892 + H281DRAFT_05138 0.23 -0.4 92,892 + H281DRAFT_05138 0.23 +0.7 92,893 - H281DRAFT_05138 0.23 -0.1 92,893 - H281DRAFT_05138 0.23 +0.5 92,894 + H281DRAFT_05138 0.23 +0.3 92,895 - -1.3 92,895 - H281DRAFT_05138 0.23 -0.0 92,899 + H281DRAFT_05138 0.23 +0.5 92,899 + H281DRAFT_05138 0.23 +0.2 92,899 + H281DRAFT_05138 0.23 +0.2 92,899 + -0.9 93,067 + H281DRAFT_05138 0.37 +0.2 93,068 - H281DRAFT_05138 0.37 +0.1 93,068 - H281DRAFT_05138 0.37 -0.5 93,068 - H281DRAFT_05138 0.37 +0.3 93,190 - H281DRAFT_05138 0.47 -0.0 93,190 - H281DRAFT_05138 0.47 -0.5 93,375 + H281DRAFT_05138 0.62 +0.5 93,375 + H281DRAFT_05138 0.62 -0.7 93,376 - H281DRAFT_05138 0.62 +1.1 93,376 - H281DRAFT_05138 0.62 -0.1 93,387 + H281DRAFT_05138 0.63 +0.5 93,388 - H281DRAFT_05138 0.63 +0.3
Or see this region's nucleotide sequence