Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_05021

Experiment: 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_05020 and H281DRAFT_05021 are separated by 163 nucleotidesH281DRAFT_05021 and H281DRAFT_05022 are separated by 180 nucleotidesH281DRAFT_05022 and H281DRAFT_05023 are separated by 116 nucleotides H281DRAFT_05020: H281DRAFT_05020 - Signal transduction histidine kinase, at 205,018 to 206,103 _05020 H281DRAFT_05021: H281DRAFT_05021 - Response regulator, at 206,267 to 206,644 _05021 H281DRAFT_05022: H281DRAFT_05022 - two component transcriptional regulator, LuxR family, at 206,825 to 207,511 _05022 H281DRAFT_05023: H281DRAFT_05023 - Predicted ATPase, at 207,628 to 212,706 _05023 Position (kb) 206 207Strain fitness (log2 ratio) -1 0 1at 205.811 kb on + strand, within H281DRAFT_05020at 206.399 kb on + strand, within H281DRAFT_05021at 206.448 kb on - strand, within H281DRAFT_05021at 206.711 kb on - strandat 206.738 kb on - strandat 206.738 kb on - strandat 206.741 kb on + strandat 206.820 kb on + strandat 206.843 kb on + strandat 207.203 kb on + strand, within H281DRAFT_05022at 207.203 kb on + strand, within H281DRAFT_05022at 207.629 kb on + strandat 207.629 kb on + strandat 207.630 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
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205,811 + H281DRAFT_05020 0.73 +0.2
206,399 + H281DRAFT_05021 0.35 +0.8
206,448 - H281DRAFT_05021 0.48 +0.1
206,711 - -0.4
206,738 - -0.0
206,738 - -0.2
206,741 + +0.4
206,820 + -0.9
206,843 + +0.1
207,203 + H281DRAFT_05022 0.55 +0.8
207,203 + H281DRAFT_05022 0.55 +0.7
207,629 + -0.4
207,629 + -0.7
207,630 - +0.5

Or see this region's nucleotide sequence