Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04929

Experiment: 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04928 and H281DRAFT_04929 are separated by 101 nucleotidesH281DRAFT_04929 and H281DRAFT_04930 are separated by 215 nucleotides H281DRAFT_04928: H281DRAFT_04928 - putative ATP-binding cassette transporter, at 109,514 to 111,160 _04928 H281DRAFT_04929: H281DRAFT_04929 - hypothetical protein, at 111,262 to 112,164 _04929 H281DRAFT_04930: H281DRAFT_04930 - Cupin domain, at 112,380 to 113,816 _04930 Position (kb) 111 112 113Strain fitness (log2 ratio) -1 0 1 2 3 4at 111.704 kb on + strand, within H281DRAFT_04929at 111.859 kb on - strand, within H281DRAFT_04929at 111.872 kb on + strand, within H281DRAFT_04929at 112.323 kb on - strandat 113.042 kb on - strand, within H281DRAFT_04930at 113.077 kb on + strand, within H281DRAFT_04930

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
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111,704 + H281DRAFT_04929 0.49 +4.1
111,859 - H281DRAFT_04929 0.66 -0.9
111,872 + H281DRAFT_04929 0.68 +1.4
112,323 - -0.4
113,042 - H281DRAFT_04930 0.46 -0.1
113,077 + H281DRAFT_04930 0.49 +0.5

Or see this region's nucleotide sequence