Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04528

Experiment: 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04526 and H281DRAFT_04527 are separated by 213 nucleotidesH281DRAFT_04527 and H281DRAFT_04528 overlap by 4 nucleotidesH281DRAFT_04528 and H281DRAFT_04529 overlap by 4 nucleotides H281DRAFT_04526: H281DRAFT_04526 - NADPH2:quinone reductase, at 257,492 to 258,466 _04526 H281DRAFT_04527: H281DRAFT_04527 - hypothetical protein, at 258,680 to 258,793 _04527 H281DRAFT_04528: H281DRAFT_04528 - K+-transporting ATPase, KdpF subunit, at 258,790 to 258,882 _04528 H281DRAFT_04529: H281DRAFT_04529 - K+-transporting ATPase ATPase A chain, at 258,879 to 260,684 _04529 Position (kb) 258 259Strain fitness (log2 ratio) -1 0 1at 257.876 kb on + strand, within H281DRAFT_04526at 257.895 kb on - strand, within H281DRAFT_04526at 258.062 kb on + strand, within H281DRAFT_04526at 258.062 kb on + strand, within H281DRAFT_04526at 258.063 kb on - strand, within H281DRAFT_04526at 258.065 kb on - strand, within H281DRAFT_04526at 258.065 kb on - strand, within H281DRAFT_04526at 258.148 kb on + strand, within H281DRAFT_04526at 258.148 kb on + strand, within H281DRAFT_04526at 258.294 kb on - strand, within H281DRAFT_04526at 258.294 kb on - strand, within H281DRAFT_04526at 258.294 kb on - strand, within H281DRAFT_04526at 258.402 kb on + strandat 258.516 kb on - strandat 258.639 kb on + strandat 258.890 kb on + strandat 259.072 kb on - strand, within H281DRAFT_04529at 259.240 kb on - strand, within H281DRAFT_04529at 259.413 kb on + strand, within H281DRAFT_04529at 259.488 kb on + strand, within H281DRAFT_04529at 259.488 kb on + strand, within H281DRAFT_04529at 259.491 kb on - strand, within H281DRAFT_04529at 259.491 kb on - strand, within H281DRAFT_04529at 259.491 kb on - strand, within H281DRAFT_04529at 259.521 kb on + strand, within H281DRAFT_04529at 259.522 kb on - strand, within H281DRAFT_04529

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
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257,876 + H281DRAFT_04526 0.39 -1.0
257,895 - H281DRAFT_04526 0.41 +1.5
258,062 + H281DRAFT_04526 0.58 -0.4
258,062 + H281DRAFT_04526 0.58 -0.9
258,063 - H281DRAFT_04526 0.59 +0.1
258,065 - H281DRAFT_04526 0.59 -0.2
258,065 - H281DRAFT_04526 0.59 +0.8
258,148 + H281DRAFT_04526 0.67 +0.2
258,148 + H281DRAFT_04526 0.67 +0.8
258,294 - H281DRAFT_04526 0.82 +0.9
258,294 - H281DRAFT_04526 0.82 +0.5
258,294 - H281DRAFT_04526 0.82 -0.5
258,402 + +0.2
258,516 - +0.7
258,639 + +0.0
258,890 + +0.6
259,072 - H281DRAFT_04529 0.11 -0.3
259,240 - H281DRAFT_04529 0.20 -0.0
259,413 + H281DRAFT_04529 0.30 -0.5
259,488 + H281DRAFT_04529 0.34 -0.0
259,488 + H281DRAFT_04529 0.34 -0.5
259,491 - H281DRAFT_04529 0.34 +0.5
259,491 - H281DRAFT_04529 0.34 +0.4
259,491 - H281DRAFT_04529 0.34 -0.3
259,521 + H281DRAFT_04529 0.36 +0.8
259,522 - H281DRAFT_04529 0.36 -0.1

Or see this region's nucleotide sequence