Experiment: 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04217 and H281DRAFT_04218 overlap by 4 nucleotides H281DRAFT_04218 and H281DRAFT_04219 are separated by 399 nucleotides H281DRAFT_04219 and H281DRAFT_04220 are separated by 21 nucleotides
H281DRAFT_04217: H281DRAFT_04217 - putative copper resistance protein D, at 336,514 to 337,443
_04217
H281DRAFT_04218: H281DRAFT_04218 - hypothetical protein, at 337,440 to 337,817
_04218
H281DRAFT_04219: H281DRAFT_04219 - Cytochrome c553, at 338,217 to 338,936
_04219
H281DRAFT_04220: H281DRAFT_04220 - Cytochrome c, mono- and diheme variants, at 338,958 to 340,256
_04220
Position (kb) 338
339 Strain fitness (log2 ratio) -1
0
1
2
3 at 337.226 kb on + strand, within H281DRAFT_04217 at 337.227 kb on - strand, within H281DRAFT_04217 at 337.227 kb on - strand, within H281DRAFT_04217 at 337.227 kb on - strand, within H281DRAFT_04217 at 337.513 kb on + strand, within H281DRAFT_04218 at 337.751 kb on + strand, within H281DRAFT_04218 at 337.809 kb on + strand at 337.819 kb on + strand at 337.819 kb on + strand at 337.820 kb on - strand at 337.820 kb on - strand at 337.820 kb on - strand at 337.820 kb on - strand at 337.835 kb on + strand at 337.926 kb on + strand at 337.927 kb on - strand at 338.106 kb on + strand at 338.107 kb on - strand at 338.107 kb on - strand at 338.130 kb on - strand at 338.212 kb on + strand at 338.213 kb on - strand at 338.280 kb on + strand at 338.280 kb on + strand at 338.281 kb on - strand at 338.281 kb on - strand at 338.281 kb on - strand at 338.281 kb on - strand at 338.282 kb on + strand at 338.322 kb on - strand, within H281DRAFT_04219 at 338.325 kb on - strand at 338.378 kb on + strand at 338.378 kb on + strand, within H281DRAFT_04219 at 338.424 kb on + strand, within H281DRAFT_04219 at 338.425 kb on - strand, within H281DRAFT_04219 at 338.430 kb on + strand, within H281DRAFT_04219 at 338.431 kb on - strand, within H281DRAFT_04219 at 338.431 kb on - strand, within H281DRAFT_04219 at 338.484 kb on + strand, within H281DRAFT_04219 at 338.485 kb on - strand, within H281DRAFT_04219 at 338.485 kb on - strand, within H281DRAFT_04219 at 338.497 kb on - strand, within H281DRAFT_04219 at 338.511 kb on + strand, within H281DRAFT_04219 at 338.512 kb on - strand, within H281DRAFT_04219 at 338.532 kb on + strand, within H281DRAFT_04219 at 338.532 kb on + strand, within H281DRAFT_04219 at 338.532 kb on + strand, within H281DRAFT_04219 at 338.533 kb on - strand, within H281DRAFT_04219 at 338.533 kb on - strand, within H281DRAFT_04219 at 338.728 kb on - strand, within H281DRAFT_04219 at 339.114 kb on + strand at 339.114 kb on + strand, within H281DRAFT_04220 at 339.115 kb on - strand, within H281DRAFT_04220 at 339.138 kb on - strand, within H281DRAFT_04220 at 339.322 kb on - strand, within H281DRAFT_04220 at 339.346 kb on - strand, within H281DRAFT_04220 at 339.381 kb on + strand, within H281DRAFT_04220 at 339.381 kb on + strand, within H281DRAFT_04220 at 339.382 kb on - strand, within H281DRAFT_04220 at 339.382 kb on - strand, within H281DRAFT_04220 at 339.382 kb on - strand, within H281DRAFT_04220 at 339.382 kb on - strand, within H281DRAFT_04220 at 339.504 kb on + strand, within H281DRAFT_04220 at 339.505 kb on - strand, within H281DRAFT_04220 at 339.663 kb on + strand, within H281DRAFT_04220 at 339.807 kb on + strand, within H281DRAFT_04220 at 339.807 kb on + strand, within H281DRAFT_04220 at 339.808 kb on - strand, within H281DRAFT_04220 at 339.808 kb on - strand, within H281DRAFT_04220
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) remove 337,226 + H281DRAFT_04217 0.77 -0.8 337,227 - H281DRAFT_04217 0.77 -0.1 337,227 - H281DRAFT_04217 0.77 +0.4 337,227 - H281DRAFT_04217 0.77 -0.8 337,513 + H281DRAFT_04218 0.19 +0.1 337,751 + H281DRAFT_04218 0.82 +2.7 337,809 + -0.8 337,819 + -0.5 337,819 + +0.4 337,820 - +0.7 337,820 - +0.3 337,820 - +0.5 337,820 - +0.6 337,835 + -0.4 337,926 + -0.1 337,927 - -0.4 338,106 + -0.1 338,107 - -0.3 338,107 - +0.1 338,130 - +0.6 338,212 + +1.9 338,213 - +0.4 338,280 + +1.7 338,280 + +0.5 338,281 - +0.7 338,281 - +2.1 338,281 - +0.4 338,281 - -0.4 338,282 + +2.4 338,322 - H281DRAFT_04219 0.15 +0.5 338,325 - +0.9 338,378 + -0.7 338,378 + H281DRAFT_04219 0.22 +0.7 338,424 + H281DRAFT_04219 0.29 +1.0 338,425 - H281DRAFT_04219 0.29 +0.5 338,430 + H281DRAFT_04219 0.30 +0.8 338,431 - H281DRAFT_04219 0.30 +2.3 338,431 - H281DRAFT_04219 0.30 +0.9 338,484 + H281DRAFT_04219 0.37 +0.6 338,485 - H281DRAFT_04219 0.37 +0.4 338,485 - H281DRAFT_04219 0.37 -0.2 338,497 - H281DRAFT_04219 0.39 +0.2 338,511 + H281DRAFT_04219 0.41 +1.0 338,512 - H281DRAFT_04219 0.41 -0.1 338,532 + H281DRAFT_04219 0.44 +0.7 338,532 + H281DRAFT_04219 0.44 +0.4 338,532 + H281DRAFT_04219 0.44 +0.2 338,533 - H281DRAFT_04219 0.44 +3.2 338,533 - H281DRAFT_04219 0.44 +1.5 338,728 - H281DRAFT_04219 0.71 +1.4 339,114 + +1.9 339,114 + H281DRAFT_04220 0.12 +0.9 339,115 - H281DRAFT_04220 0.12 +1.0 339,138 - H281DRAFT_04220 0.14 +0.2 339,322 - H281DRAFT_04220 0.28 +1.2 339,346 - H281DRAFT_04220 0.30 +0.3 339,381 + H281DRAFT_04220 0.33 +1.2 339,381 + H281DRAFT_04220 0.33 +1.4 339,382 - H281DRAFT_04220 0.33 +1.1 339,382 - H281DRAFT_04220 0.33 +2.2 339,382 - H281DRAFT_04220 0.33 -0.1 339,382 - H281DRAFT_04220 0.33 +1.1 339,504 + H281DRAFT_04220 0.42 +2.3 339,505 - H281DRAFT_04220 0.42 +2.0 339,663 + H281DRAFT_04220 0.54 +2.3 339,807 + H281DRAFT_04220 0.65 +1.0 339,807 + H281DRAFT_04220 0.65 +1.1 339,808 - H281DRAFT_04220 0.65 +1.4 339,808 - H281DRAFT_04220 0.65 +1.7
Or see this region's nucleotide sequence