Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03053

Experiment: 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03052 and H281DRAFT_03053 are separated by 174 nucleotidesH281DRAFT_03053 and H281DRAFT_03054 are separated by 781 nucleotides H281DRAFT_03052: H281DRAFT_03052 - L-threonine aldolase, at 81,008 to 82,015 _03052 H281DRAFT_03053: H281DRAFT_03053 - MFS transporter, DHA2 family, multidrug resistance protein, at 82,190 to 83,557 _03053 H281DRAFT_03054: H281DRAFT_03054 - glycogen phosphorylase, at 84,339 to 86,792 _03054 Position (kb) 82 83 84Strain fitness (log2 ratio) -2 -1 0 1at 81.233 kb on + strand, within H281DRAFT_03052at 81.261 kb on - strand, within H281DRAFT_03052at 81.266 kb on + strand, within H281DRAFT_03052at 81.267 kb on - strand, within H281DRAFT_03052at 81.449 kb on + strand, within H281DRAFT_03052at 81.450 kb on - strand, within H281DRAFT_03052at 81.450 kb on - strand, within H281DRAFT_03052at 81.450 kb on - strand, within H281DRAFT_03052at 81.450 kb on - strand, within H281DRAFT_03052at 81.725 kb on + strand, within H281DRAFT_03052at 81.725 kb on + strand, within H281DRAFT_03052at 81.910 kb on + strand, within H281DRAFT_03052at 81.911 kb on - strand, within H281DRAFT_03052at 81.911 kb on - strand, within H281DRAFT_03052at 81.923 kb on + strandat 81.924 kb on - strandat 82.143 kb on + strandat 82.144 kb on - strandat 82.532 kb on + strand, within H281DRAFT_03053at 82.697 kb on + strand, within H281DRAFT_03053at 82.697 kb on + strand, within H281DRAFT_03053at 82.698 kb on - strand, within H281DRAFT_03053at 82.698 kb on - strand, within H281DRAFT_03053at 82.698 kb on - strand, within H281DRAFT_03053at 83.311 kb on + strand, within H281DRAFT_03053at 83.687 kb on + strandat 83.823 kb on - strandat 83.923 kb on + strandat 83.923 kb on + strandat 84.162 kb on + strandat 84.163 kb on - strandat 84.235 kb on + strandat 84.246 kb on - strandat 84.420 kb on + strandat 84.421 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
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81,233 + H281DRAFT_03052 0.22 -0.0
81,261 - H281DRAFT_03052 0.25 -0.4
81,266 + H281DRAFT_03052 0.26 +0.3
81,267 - H281DRAFT_03052 0.26 -0.7
81,449 + H281DRAFT_03052 0.44 +1.5
81,450 - H281DRAFT_03052 0.44 +0.3
81,450 - H281DRAFT_03052 0.44 -0.6
81,450 - H281DRAFT_03052 0.44 -0.3
81,450 - H281DRAFT_03052 0.44 +0.0
81,725 + H281DRAFT_03052 0.71 +0.3
81,725 + H281DRAFT_03052 0.71 -1.1
81,910 + H281DRAFT_03052 0.89 +0.6
81,911 - H281DRAFT_03052 0.90 +0.6
81,911 - H281DRAFT_03052 0.90 +0.8
81,923 + +0.6
81,924 - +0.3
82,143 + +1.1
82,144 - -1.8
82,532 + H281DRAFT_03053 0.25 -0.3
82,697 + H281DRAFT_03053 0.37 -0.5
82,697 + H281DRAFT_03053 0.37 -0.5
82,698 - H281DRAFT_03053 0.37 -0.0
82,698 - H281DRAFT_03053 0.37 -0.2
82,698 - H281DRAFT_03053 0.37 +0.2
83,311 + H281DRAFT_03053 0.82 -0.9
83,687 + +0.5
83,823 - -0.3
83,923 + +0.5
83,923 + +0.2
84,162 + +0.4
84,163 - +0.5
84,235 + -0.0
84,246 - +0.4
84,420 + +0.3
84,421 - -1.9

Or see this region's nucleotide sequence