Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01829

Experiment: 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01828 and H281DRAFT_01829 are separated by 49 nucleotidesH281DRAFT_01829 and H281DRAFT_01830 are separated by 95 nucleotides H281DRAFT_01828: H281DRAFT_01828 - Sugar phosphate permease, at 733,711 to 735,030 _01828 H281DRAFT_01829: H281DRAFT_01829 - 4-hydroxy-tetrahydrodipicolinate synthase, at 735,080 to 736,039 _01829 H281DRAFT_01830: H281DRAFT_01830 - transcriptional regulator, LacI family, at 736,135 to 737,229 _01830 Position (kb) 735 736 737Strain fitness (log2 ratio) -1 0 1 2at 734.280 kb on - strand, within H281DRAFT_01828at 734.474 kb on - strand, within H281DRAFT_01828at 734.474 kb on - strand, within H281DRAFT_01828at 734.474 kb on - strand, within H281DRAFT_01828at 734.494 kb on + strand, within H281DRAFT_01828at 734.495 kb on - strand, within H281DRAFT_01828at 734.731 kb on - strand, within H281DRAFT_01828at 734.960 kb on - strandat 735.168 kb on - strandat 735.414 kb on + strand, within H281DRAFT_01829at 735.571 kb on - strand, within H281DRAFT_01829at 735.765 kb on - strand, within H281DRAFT_01829at 735.881 kb on + strand, within H281DRAFT_01829at 736.654 kb on + strand, within H281DRAFT_01830at 736.711 kb on + strand, within H281DRAFT_01830at 736.950 kb on + strand, within H281DRAFT_01830at 737.027 kb on + strand, within H281DRAFT_01830at 737.028 kb on - strand, within H281DRAFT_01830at 737.034 kb on - strand, within H281DRAFT_01830

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
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734,280 - H281DRAFT_01828 0.43 +0.0
734,474 - H281DRAFT_01828 0.58 +0.1
734,474 - H281DRAFT_01828 0.58 +1.3
734,474 - H281DRAFT_01828 0.58 -0.4
734,494 + H281DRAFT_01828 0.59 +1.4
734,495 - H281DRAFT_01828 0.59 +0.0
734,731 - H281DRAFT_01828 0.77 +0.6
734,960 - -0.0
735,168 - +0.6
735,414 + H281DRAFT_01829 0.35 -0.1
735,571 - H281DRAFT_01829 0.51 +1.1
735,765 - H281DRAFT_01829 0.71 -0.2
735,881 + H281DRAFT_01829 0.83 +1.8
736,654 + H281DRAFT_01830 0.47 -0.4
736,711 + H281DRAFT_01830 0.53 +0.7
736,950 + H281DRAFT_01830 0.74 -0.3
737,027 + H281DRAFT_01830 0.81 -0.6
737,028 - H281DRAFT_01830 0.82 +1.0
737,034 - H281DRAFT_01830 0.82 +0.2

Or see this region's nucleotide sequence